Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3237 |
Symbol | |
ID | 5540735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4206663 |
End bp | 4207502 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640895358 |
Product | abortive infection protein |
Protein accession | YP_001433309 |
Protein GI | 156743180 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATACGC TTGATGTGCC GGCGTCGCGT TTGCCGATGC GGGTGACGCC GCTCGCGGCG ATTGGCGCAC TGATCGCCGA TCTGCTGATT GCGCTTGGCG CAGCGCTTGC GCTCAGTGGA GCAGTCGTTG GCGCAATTCT GGTCCTGCGC GCTGCACAGT CCGGCCTCGA ACTCGGCGCC ATCGGGCAAC TGAACGGTCA GGATATTACT CGACTGATCG GCGCCGATGG TATGGTCGCT CTGCTGCTGC TGCAAAACCT GGTCTTCATC GGCGTCGCTG TGGTGCGCGT GCGCGTGTTA CGCCGCGAGC CGCTCTCGGT GCTGGGATTC AGCGCCCCAC AACCGTTTCG ATTAGTCTTC CTTGGCGTCG GATTGGGGTT GCTGGCGCTC CTCTTGAACG GCATCGTCGG CGTTCTGTTC GTCAGCGCCG GCATTCGCCA GAATCAGGCG GCGCTCTATC CGCTCTTTCC GGGGGATTAC GCAGGGCAGG CGCTCTTCTT CATCGGCGCA GTCGTGCTGG CGCCCATCGG CGAAGAGGTG CTGTTCCGCG GCTACCTCTT CGGCTCGCTG CGACGGCTCG CGGGCGACTC GCGCGCCGGT ATCGCCGTTG CTTACGGCGT CAGCGCACTG GTCTTCGCCC TGTCGCATTC GCTGGCTGCC ACCGAAGGTC TCATCGGGCT GCTCGTGCCA TCATTCCTGA TCGGTCTGGT GTTTGCCTGG GGGTTTGACC GCAGCGGCAG CCTGATCCCG GCGATTGTGG CGCACGCTAT CAACAATGGC ATCGCATTCG CTGCACTGCT GACATGCGTC AATAATCCGG GCATGTGCCC GCAAATGTAA
|
Protein sequence | MNTLDVPASR LPMRVTPLAA IGALIADLLI ALGAALALSG AVVGAILVLR AAQSGLELGA IGQLNGQDIT RLIGADGMVA LLLLQNLVFI GVAVVRVRVL RREPLSVLGF SAPQPFRLVF LGVGLGLLAL LLNGIVGVLF VSAGIRQNQA ALYPLFPGDY AGQALFFIGA VVLAPIGEEV LFRGYLFGSL RRLAGDSRAG IAVAYGVSAL VFALSHSLAA TEGLIGLLVP SFLIGLVFAW GFDRSGSLIP AIVAHAINNG IAFAALLTCV NNPGMCPQM
|
| |