Gene Rcas_3237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3237 
Symbol 
ID5540735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4206663 
End bp4207502 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content63% 
IMG OID640895358 
Productabortive infection protein 
Protein accessionYP_001433309 
Protein GI156743180 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGC TTGATGTGCC GGCGTCGCGT TTGCCGATGC GGGTGACGCC GCTCGCGGCG 
ATTGGCGCAC TGATCGCCGA TCTGCTGATT GCGCTTGGCG CAGCGCTTGC GCTCAGTGGA
GCAGTCGTTG GCGCAATTCT GGTCCTGCGC GCTGCACAGT CCGGCCTCGA ACTCGGCGCC
ATCGGGCAAC TGAACGGTCA GGATATTACT CGACTGATCG GCGCCGATGG TATGGTCGCT
CTGCTGCTGC TGCAAAACCT GGTCTTCATC GGCGTCGCTG TGGTGCGCGT GCGCGTGTTA
CGCCGCGAGC CGCTCTCGGT GCTGGGATTC AGCGCCCCAC AACCGTTTCG ATTAGTCTTC
CTTGGCGTCG GATTGGGGTT GCTGGCGCTC CTCTTGAACG GCATCGTCGG CGTTCTGTTC
GTCAGCGCCG GCATTCGCCA GAATCAGGCG GCGCTCTATC CGCTCTTTCC GGGGGATTAC
GCAGGGCAGG CGCTCTTCTT CATCGGCGCA GTCGTGCTGG CGCCCATCGG CGAAGAGGTG
CTGTTCCGCG GCTACCTCTT CGGCTCGCTG CGACGGCTCG CGGGCGACTC GCGCGCCGGT
ATCGCCGTTG CTTACGGCGT CAGCGCACTG GTCTTCGCCC TGTCGCATTC GCTGGCTGCC
ACCGAAGGTC TCATCGGGCT GCTCGTGCCA TCATTCCTGA TCGGTCTGGT GTTTGCCTGG
GGGTTTGACC GCAGCGGCAG CCTGATCCCG GCGATTGTGG CGCACGCTAT CAACAATGGC
ATCGCATTCG CTGCACTGCT GACATGCGTC AATAATCCGG GCATGTGCCC GCAAATGTAA
 
Protein sequence
MNTLDVPASR LPMRVTPLAA IGALIADLLI ALGAALALSG AVVGAILVLR AAQSGLELGA 
IGQLNGQDIT RLIGADGMVA LLLLQNLVFI GVAVVRVRVL RREPLSVLGF SAPQPFRLVF
LGVGLGLLAL LLNGIVGVLF VSAGIRQNQA ALYPLFPGDY AGQALFFIGA VVLAPIGEEV
LFRGYLFGSL RRLAGDSRAG IAVAYGVSAL VFALSHSLAA TEGLIGLLVP SFLIGLVFAW
GFDRSGSLIP AIVAHAINNG IAFAALLTCV NNPGMCPQM