| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3214 |
|---|
| Symbol | |
|---|
| ID | 5540712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 4182162 |
|---|
| End bp | 4182581 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640895335 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001433286 |
|---|
| Protein GI | 156743157 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0679037 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTCAAGC ATTCTGTTCG ATGGCGAGCG CCATTCCACA TAATATTGCT CGTGGTTGCA
GGTATCAGCA TCGGCGCATG CGGCGCAACA CCGACTATTG TCGAGGAGCG GGCAGTCGAT
GGACTGACGA TTGCCCTCGA ACGTCCGGCG CAACCGGTGG CGTTGCGCAA CTATGCGTTC
ACCGCAACAA TTACCAACGC CGCCGATCAA CCGGTCGAGG CGGATCTGGT CTATTTCGAC
TTTACCATGC CGCAAATGGA AATGGGCGTG CACCAGCCAA TCGCCGACCG GCTTGGTCCG
GGCAAATATG GCGTTCGCAC GATTTATTCG ATGGAAGGAG ACTGGCGCAT CACGATTGTT
GCCACGATTG AGGGGCGCGA TGTGCGCGTC TGGTTCGATC ATCCGGTTCT TCCGCCATAG
|
|---|
| Protein sequence | MFKHSVRWRA PFHIILLVVA GISIGACGAT PTIVEERAVD GLTIALERPA QPVALRNYAF
TATITNAADQ PVEADLVYFD FTMPQMEMGV HQPIADRLGP GKYGVRTIYS MEGDWRITIV
ATIEGRDVRV WFDHPVLPP
|
|---|
| |