Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3203 |
Symbol | sucC |
ID | 5540701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4163559 |
End bp | 4164698 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640895324 |
Product | succinyl-CoA synthetase subunit beta |
Protein accession | YP_001433275 |
Protein GI | 156743146 |
COG category | [C] Energy production and conversion |
COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.399837 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTGC ACGAGTACCA GGCGCGCGAT ATTCTGGCGC GCTACGGCGT ACCGGTGACG GGCGGCGGCG TTGCGACAAC GCCGGCGGAG GCGCGCGCGA TTGCCGAACA GATCGGCGGG CGGGTCGTGG TCAAGGCGCA GGTGTTCGTT GGCGGGCGCG GCAAGGCAGG TGGTGTCAAA CTCGCCGATA CCCCCGAACA GGCGGAGCAG GTTGCCGGTC AAATCCTGGG GATGAATATC AAGGGATTGA CCGTCGAGAA GGTGCTGGTT GCCGAAGCCA TCACCTACGA GCGTGAAATC TATCTGGGCG CGATTATGGA CCGCGCCTCG CGGCGGATCG TCATGATGGC GTCGGCGGAA GGTGGCGTCG AAATCGAGGA AGTTGCCAGA ACCAACCCGG AGGCAATCGT CAAAGTGGCA GCGCATCCGA TGCTGGGGCT GCTCGATTTC CAGGCGCGCG ATCTCGCCTA CGGTATTGGG TTGACCGACG CGAAACAGGC GCGTCAATTC GCGCAGATTG CCACGGCGCT CTACCGCGCT TACATGGATG TCGATGCGTC GCTGGCGGAG ATTAATCCGC TCGTGGTGCG CGCCGATGGT TCGTTGCAGG CGCTCGACTC GAAGATTGTG CTCGACGACA GCGGTCTCTT CCGCCATCCC GACCTTGAGG CGATGCGCGA TGCATCGGAT GAGCCGGAAG CCGAGCAGCG CGCCCGTGAG GCAGGTATCA CCTATATCAA ACTCGACGGC GACATCGGAT GCATGGTGAA CGGCGCCGGG TTGGCGATGG CGACGATGGA TGTCATCAAA CTATACGGCG GCGAGCCTGC CAACTTCCTC GACATCGGCG GTGGTGCAAG CAAGGAGAAG GTCAAGACTG CTCTTCAGAT CATCCTCTCC GATCCGAACG TCAAAGCAGT CATGTTCAAT ATCTTCGGCG GCATCACTCG TGTCGACGAA GTGGCGAAGG GCATCGTCGC TGCACTGTCG GAGGTTCAGA CCAACGTGCC CATGATTGCC CGGTTGGTCG GCACGAACGA AGAAGAAGGG CGACGCATCC TGGCGGAGTC GGCGTTGATT CCGGCAGCGA CGCTGGCGGA AGCGGCAGAG AAAGCCGTCC ACGCCGCGCG CGCAGGGTGA
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Protein sequence | MKLHEYQARD ILARYGVPVT GGGVATTPAE ARAIAEQIGG RVVVKAQVFV GGRGKAGGVK LADTPEQAEQ VAGQILGMNI KGLTVEKVLV AEAITYEREI YLGAIMDRAS RRIVMMASAE GGVEIEEVAR TNPEAIVKVA AHPMLGLLDF QARDLAYGIG LTDAKQARQF AQIATALYRA YMDVDASLAE INPLVVRADG SLQALDSKIV LDDSGLFRHP DLEAMRDASD EPEAEQRARE AGITYIKLDG DIGCMVNGAG LAMATMDVIK LYGGEPANFL DIGGGASKEK VKTALQIILS DPNVKAVMFN IFGGITRVDE VAKGIVAALS EVQTNVPMIA RLVGTNEEEG RRILAESALI PAATLAEAAE KAVHAARAG
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