Gene Rcas_3131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3131 
Symbol 
ID5540627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4056764 
End bp4057867 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content57% 
IMG OID640895250 
Productcell cycle protein 
Protein accessionYP_001433203 
Protein GI156743074 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0772] Bacterial cell division membrane protein 
TIGRFAM ID[TIGR02210] rod shape-determining protein RodA 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAGAA CCTGGCGCGA TTACAATTTC CCGCTGTTCC TCTGCGTCGT CATCCTGTTG 
ATTTTTGGCG CTGCCATGGT CTATAGCGCC ACCCTGCGCG ACCCGCTGAC CCAGGGATAT
TTTTCGCGGC ACCTGGTCAA TCTGCTGGTC GGATGCGCCG CCATGGCAGT GATGACCGCG
ATCGATTACC ACTTCTTCGA GTCCTGGATT GTCCCGTTCT ATCTTGGCGC TGTGGCGTTG
CTGGGGTTGG TGCTGGCAAT TGGTCAGGTC AGTTCCGGCG CACAAAGCTG GATCGATCTC
GGTGTTCGAA CGTTTCAGCC CTCAGAACCG GTGAAACTGC TGGTCATTCT TGCGCTGGCC
GCATACTGGT CCCGTAATGA ACGTCAACCA TCTGCATGGC GTGTGGTTAT CACCAGCCTG
ATCCTGGTTG GCATTCCCAC GGTGCTGGTC TTTCTGCAAC CCGATTTTGG CACCGCAATG
GTCTTCGGCG CTATCTGGCT GGCAATGGCG CTGGCGGCTG GCGTGCGTTG GCAGCAGTTC
GTCGTCCTGT TTGTCGCCGC CCTCCCCGCT GCAATGTATG GTTGGACCCA TATTCTTCGT
CCCTATCAGC GTGATCGTCT GCTGATCTTT ATCGATCCGC TGAAATACGA CCCGGAACTG
AAACAGGGCG CGTGGAACAT CATGCAGTCG TTGACAGCGA TTGGATCGGG TGGTCTGACC
GGTCGCGGAT GGACGCACGG CTTGTTGAGT CAGGGCAACT ACTTGCCGGT GCAATACTCC
GATTTTATCT TTGCAATTAC CGGGGAAGAG TTGGGGTTCA TTGGCGCGAC GTTGCTGCTC
GTCTTTTTGG GCGTAACCGT CTGGCAGGCG CTGACGGTCG CTCAGGCGGC GCGTGACTCG
TTTGGGCGCC TGATAGCAAC GGGGATTGCG GCAATGCTGT TGTGCCACGT GCTTGTCAAT
GTGGGCATGA ACATGAGCAT CATGCCGATC ACTGGCATCC CCCTGCCGTT TATCTCCTAT
GGCGGCAGCT TCACCCTGAC AACACTGGCG GCGGTCGGAT TACTTCAGAG CATCGCACTG
CGCCGACGGC GCATCACATT CTGA
 
Protein sequence
MVRTWRDYNF PLFLCVVILL IFGAAMVYSA TLRDPLTQGY FSRHLVNLLV GCAAMAVMTA 
IDYHFFESWI VPFYLGAVAL LGLVLAIGQV SSGAQSWIDL GVRTFQPSEP VKLLVILALA
AYWSRNERQP SAWRVVITSL ILVGIPTVLV FLQPDFGTAM VFGAIWLAMA LAAGVRWQQF
VVLFVAALPA AMYGWTHILR PYQRDRLLIF IDPLKYDPEL KQGAWNIMQS LTAIGSGGLT
GRGWTHGLLS QGNYLPVQYS DFIFAITGEE LGFIGATLLL VFLGVTVWQA LTVAQAARDS
FGRLIATGIA AMLLCHVLVN VGMNMSIMPI TGIPLPFISY GGSFTLTTLA AVGLLQSIAL
RRRRITF