| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3114 |
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| Symbol | |
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| ID | 5540610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4032564 |
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| End bp | 4034498 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895233 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001433186 |
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| Protein GI | 156743057 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.582192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCCG AACACGTGGC GCCTGCGCCC AATCAAACCA TTCAGATCTC AGCACTGATC
CGTCGGCTCT ACCAGCCAAC CGCTATTGCT TCTGCCATCA CCCTCACGCT CACCAGTATT
GCCATCGCTA TGTTCCAGCA ATGGTCTCTC TCCACGCTTG CCATCGGCGT CGGACTGGCG
ATCCTGCTTC TGCTCTGTGA TCGTTTTCCT GTGCGCGTGC AGGACAGATG GCGACTCACG
CCAGCGCCTG TTGTGCTCGT GGCAGGAGCA ATGATGACCG CCTGGTCTCC CGCGCTGATC
GCAACGCTGG TCGGCAGCCT GCTCTCAACG CGACGACCCT GGCAGCGCAC GGTTCGCATC
ATTGCTATTC GCACATTAAT CGTCAGCGGA GTCGCGCTTA TGGCATGGGT TGTGCCGGCG
ACGCCACCAC TCGTTCCATC ACTGGCGCTG GCATTGTTGG TGGGCGCTGG TTACCTGCTC
GAAGCGCTCT TCGACACGGC AGAGATGCAT TGGTCGACGC GCCTGCGCCA CAGCATCGTC
GCACTGCCAT GGTACGTCCC CGTGATGGCG CTTCACGGCG CGCTATTCGG CGCTTTCTGG
CCCGCCGCGC CCGAGGCGCT GCCGTTTACA CTGGCGCTGC TTGGGTGCGT GCAGTTTCTG
GCGCGCAATC AGGCGCGCCA GGGTCATATC AATGCCGAAT TGACCGATCT GCGCGAGCAG
CTCAGCACAC GCACTGAACG TCTCGAGCGC CTCCAGGCGC TGGCAACTGC TATGCTGGCA
ACCCTCGATG ACCGGCGTCA ACTTCAACTC CTCTGTGAAC GCCTTGCCGC CCTGCTCGAC
GCCGAGGCCG GTTGGGTCGC CCTCGACGAC AATGATGCTT TGCGCGTGCT GGCGGTGCAT
CGGCTGACGC TCGAACGTCC CGATCTGCCG CTGACGGACC AGCAATGGTA TCGTGAGATC
ATGCAGCGCG GACAGATCAC CATGATTGCC GGGGAACATA TCCTGCGCCT GGCGCCACCG
ATCACATCCG ATGATCCCAT GCGTTGGTCG ACGCTGCTGG CGCTCCCGCT CCGAACCGAC
CACGGCGCGC TTGGTGTGAT CTGCCTGGCA TTCGACCACT TGCGTGGTCT TAATAGCGAT
GATCAACGCA TTCTGACGTC GTTCACCCGC CAGGCGGCTG TGGCGATTGA GAATACTCGC
CTATTCACCG AGCTTCGCCA GAAGCAGGCG GAACTGATCC AGTCCTCGAA ACTGGCAGCA
GTTGGCACCT TTGCGGCAGG CATCGGACAC GAATTCAACA ATCTGCTTGG CGGCATGCTT
GGCTATGCCG AACTGGGGCG CAGCACCGGC GATATTGCTG AAAAAGACCA CGCACTCGAT
GTCATCCGGC AGGCATGCCA GCGCGGACGG GTTATCACGA GCGGCTTGCT GACCTTCGCG
CGGCGCAGTG AGCATCGCCG CGAGGTGCAC CATCTTGCCG ACATCATTGC CGAAACTCTG
ACGCTTGTCG AGGTCGATCT GCGGAAACTC AATATTACGC TGGCGCGCCA TATCGAACCT
ACACCATCGA TTCTCTGCGA TGGCGGACAG ATTGCCCAGG TTCTGCTGAA CCTTGTGACG
AACGCGCGCG ATGCCATTGG GCAGAATGGT GGAACGATCA CCGTCTCGCT CCGGCAGTGC
GACGAATGGG TCGAACTCAG TGTTCTCGAC ACCGGTGGAG GCATTCCCGA GCATGTGCGT
GACCGCATCT TCGAACCGTT CGTCACGACG AAAGGCGCGC TCGGCGCCAG CAGCACTCCT
GGGACCGGAT TGGGGCTGTC GGTATCCTAT GGCATCATTA AGGATCATGG AGGGGATATT
CAGTTTGAAA CCGAGACCGG CGTTGGCACG AACATGATTG TGCGTTTGCC GATCCATCCG
CCATCGTCGC AGTGA
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| Protein sequence | MSSEHVAPAP NQTIQISALI RRLYQPTAIA SAITLTLTSI AIAMFQQWSL STLAIGVGLA
ILLLLCDRFP VRVQDRWRLT PAPVVLVAGA MMTAWSPALI ATLVGSLLST RRPWQRTVRI
IAIRTLIVSG VALMAWVVPA TPPLVPSLAL ALLVGAGYLL EALFDTAEMH WSTRLRHSIV
ALPWYVPVMA LHGALFGAFW PAAPEALPFT LALLGCVQFL ARNQARQGHI NAELTDLREQ
LSTRTERLER LQALATAMLA TLDDRRQLQL LCERLAALLD AEAGWVALDD NDALRVLAVH
RLTLERPDLP LTDQQWYREI MQRGQITMIA GEHILRLAPP ITSDDPMRWS TLLALPLRTD
HGALGVICLA FDHLRGLNSD DQRILTSFTR QAAVAIENTR LFTELRQKQA ELIQSSKLAA
VGTFAAGIGH EFNNLLGGML GYAELGRSTG DIAEKDHALD VIRQACQRGR VITSGLLTFA
RRSEHRREVH HLADIIAETL TLVEVDLRKL NITLARHIEP TPSILCDGGQ IAQVLLNLVT
NARDAIGQNG GTITVSLRQC DEWVELSVLD TGGGIPEHVR DRIFEPFVTT KGALGASSTP
GTGLGLSVSY GIIKDHGGDI QFETETGVGT NMIVRLPIHP PSSQ
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