| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3086 |
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| Symbol | |
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| ID | 5540582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3998794 |
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| End bp | 4000791 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895205 |
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| Product | polymorphic outer membrane protein |
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| Protein accession | YP_001433158 |
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| Protein GI | 156743029 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCT CACGACCACC CAGTCGCTGG CGTCGTCTGC TGGCGCATAT CTGCCTGACC
ATCCTGTGTG TCAGCGCGAC AGTTCCGCCA CTGCCCGGTA TGGCATCGGC GCCTGCCGGC
GCTCCTGGCG CGCCTCCCGC TGCCTGCACC CCTCCGATTG TGCCGGTGAC GCTGGTCAAT
CCGACGGTCA TCACCAGTTG CACGCAGGCG AACCTTCAGG CGGCGCTTGC GACCGGCGGG
CATATCACCT TCGACTGCGG ACCCCACCCG GTCACGATTC CGATCACTTC GCCACTGGTC
ACCTCAGCGA CCCGCGATAT TGTGCTGGAT GGTAAAGGAC TGATCACGCT CGATGGCGGC
GGTGTCACCC GTATTCTCGA AAAACCGTTT ACCCCGGGTT CGCACATTGA TAAGACCTCC
GGCAACGATC TGGTCATCCA GAATATGCGC TTTATCAATG GGCGCGCGCC GGCCGCCACG
AAAACGCAGG ACGACAAAGC GCGCGGTGGG GCGCTGTGGG TGACGAGTCC GGGAACACGC
CTCCATATCA TCAACTCGAT CTTCGAGAAC AACCGCACGA CCAGCATGAC CGACGAGGAC
AATCAAGGCG GTGCGATCTA TGCCGGCAAT ATCTACGAAA CGGTCATCGT CGGGTCGGTC
TTTGTCAACA ATGAGGCCGG CAGCGGCGGC GCATTCGGCG GAATTGCGAC CGGCTTGCAG
GTCTACAACT CGCGGTTCAC GAACAACCGC GCCGCTGACG CGACGACGGG CGGCATTGTG
CGAGGGCATG GCGGCGCCAT TCATCTCGAT GGCGTCAGCA ATAGCTTCAA TCCGATCACC
GGTAACACTG TCGAGGTCTG CGGCAGCGTG TTCGATGGAA ACACTGCAAC GCGCGGCGGC
GGCGCACTCA AAGTGACGAT CTCCGATAAC CTGAACACGA AAGCGACCTA TGCCCGCTCG
ACCTTTAGCA ACAACCGGGT GCTCGACTCA CCGCCCGCTG AAGGTCACGG CGGCGCTATT
TATCATATCG AAGACGACCT GGCAGGTGGG GTGAATGAGG ACAATATCGA GATCCGCGAG
TCGACGTTCA ACGGCAACTA TGCCGCAAGG CAAGGAGGTG GCGTCTGGAT GTCGGTGAAC
GGTCGCGGAC GGGTGGTGAA CTCAACGTTC TTCGACAATC GCGCCGCAAC CGCCGGAACC
AACGTCATCG GTCAGGGAGG CGGCATGATC ATCAGCAGAG GGACCATCGA CATTATTCAC
GCGACGTTTG CGAGCAATTT CGCCACGTTT CAGGGTGGTG CGATCTTTGC CGGTAATCCG
TCAGCAGCGG CAGTGACACT GACCAGTTCA ATCTTCTCTG CTAATCGCCT CGATCCAACG
CACACGAACC CGGTCACAAC CGAGTTTCAG GGGTACCACA CGAACCGTGC ATTGCTCAAT
GGCGGCGGTA ACATTCAGTT TCCACGCACC AAAGCGCCCG ATTTCAATAA CGACATCAAC
AACCTGATAA CCTCACCGGC TTCGGCAATC CTCTTCCAGG ACCCACAACT CGCGCCGCTG
GCAAACAATG GCGGTCCCAC ACCGACGATG GCAATTGCGG CGTCCAGTCC GGGGTTCAAC
CGCGCTGCGG CGGCGACGTG CCCGGCAGCC GATCAGCGCG GCGTCATTCG TCCGCAGGGA
GGCGCCTGTG ATGTGGGAGC GTATGAACTG GTGTTGGCGC TATCGCTCAC GCCGCCGTTT
GTTGGCGTCG GCGAAGCAGG AACGGTTGTG ATCGTCTCCG GCGCCGGCTT CGACGCGAGC
AGCACGATCG TCATCGGCGG CGTTGAACGT CCGACAACGT TTGTCAGCGC CACTGAACTG
CGCACCACGC TCACTGCGGC TGATGTGGCG AACGCTGGCG ATCTGGAGGT GCGGGTCAGC
AACTCGGCGC TGCCGCCGGT CACGCTGCGC GTCCTGGCGC AGGTCTATCG TGGCTATTTG
CCGATCGTTC GTCGCTGA
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| Protein sequence | MNTSRPPSRW RRLLAHICLT ILCVSATVPP LPGMASAPAG APGAPPAACT PPIVPVTLVN
PTVITSCTQA NLQAALATGG HITFDCGPHP VTIPITSPLV TSATRDIVLD GKGLITLDGG
GVTRILEKPF TPGSHIDKTS GNDLVIQNMR FINGRAPAAT KTQDDKARGG ALWVTSPGTR
LHIINSIFEN NRTTSMTDED NQGGAIYAGN IYETVIVGSV FVNNEAGSGG AFGGIATGLQ
VYNSRFTNNR AADATTGGIV RGHGGAIHLD GVSNSFNPIT GNTVEVCGSV FDGNTATRGG
GALKVTISDN LNTKATYARS TFSNNRVLDS PPAEGHGGAI YHIEDDLAGG VNEDNIEIRE
STFNGNYAAR QGGGVWMSVN GRGRVVNSTF FDNRAATAGT NVIGQGGGMI ISRGTIDIIH
ATFASNFATF QGGAIFAGNP SAAAVTLTSS IFSANRLDPT HTNPVTTEFQ GYHTNRALLN
GGGNIQFPRT KAPDFNNDIN NLITSPASAI LFQDPQLAPL ANNGGPTPTM AIAASSPGFN
RAAAATCPAA DQRGVIRPQG GACDVGAYEL VLALSLTPPF VGVGEAGTVV IVSGAGFDAS
STIVIGGVER PTTFVSATEL RTTLTAADVA NAGDLEVRVS NSALPPVTLR VLAQVYRGYL
PIVRR
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