Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3083 |
Symbol | |
ID | 5540579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3994000 |
End bp | 3995307 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640895202 |
Product | UDP-glucose 6-dehydrogenase |
Protein accession | YP_001433155 |
Protein GI | 156743026 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGT TATCTTCCAG AGATCGGTTG CTGCGGCGCA TTGCCGACCG TTCGGCACGT ATCGGCATTG TTGGGGTCGG GTATGTCGGG TTGCCGCTGG CTGCGGTGTT CGGCGCCGCC GGGTTGCGCG TCACTGGCGT CGATGCCAGC GCGGAGCGCG TCGCTGCTAT CAATGCCGGG CGCAGTTATA TCGACGACGT GCCAACCGAC GTGGTGGCGC AGTTGCGCGC CGACGGTTTG CTCGACGCCA CTACCGACTT CGACGTGCTG GCGGAACTTG ATGCGATCAG CATCTGCGTG CCGACGCCGC TGCGCAAAAC CCGCGATCCT GATATTTCGG CGATTATGGC GGTGACGGAA CAGATTGCGC AGCGTCTGCG CCCCGGTCAG GTGATCGTTC TGGAAAGCAC CACCTATCCC GGCACCACTC GTGAAGTCAT TCTGCCGCGT CTCGAAGCGA GCGGCTTGAC GGTCGGCACG GATTACTTTC TGGCGTTTTC TCCCGAACGG GTCGATCCCG GTCGCGCCGA CTGGACGACG CGCAATACGC CGAAGGTGAT GGGCGGCGTC ACGCCTGCCT GTCTGGAAGT GGCGCGCGCC TTGTACGAAA CGGCAATCGA ACGGGTGGTG CCGGTCAGCA GCCCGGAAGT CGCGGAAATG GTCAAGTTGC TCGAAAACAC GTTCCGTGCC GTCAATATTG GGCTGGTCAA TGAAGTGCTC CTCATGTGCG ACAAACTGGG GCTGGATGTG TGGGAAGTGA TCGATGCAGC CGCAACCAAA CCGTTCGGGT TTATGAAGTT TACGCCTGGA CCGGGGTTAG GCGGGCACTG CATTCCGATC GATCCGCTCT ATCTGTCGTG GAAGCTGAAA ACGCTCAACT ATACAGCGCG GTTTATCGAC CTGGCGAGTG AGGTCAATAC CGAAATGCCG CGCTACTGGG TGCAGAAGGT GCAGGACGCG CTCAACGACG CGGGGCGAGC GGTTAAGGGC AGCCGTGTGC TGGTGCTGGG GGTCGCCTAC AAACGTGATG TCGATGATGT GCGCGAGTCG CCTGCGCTCG ACATCATGCA CCTGCTCTAC GAGAAAGGCG CGCAGGTGAC CTACCACGAT CCACATGTGC CGGAGGTGCA GATCGAAGGT GTGCGGCTGC GCTGTGAGCC AGACCTTGAT GCAGCGCTCC GGGCGGCGGA TTGTGTGATC ATTGTCACCG ATCACTCGGC GTATGACTGG CAGCGGATCG CGCGCCAGGC GTGGCGTGTC GTCGATACTC GCGGCGCCTT GCGTCATCTG GCGAGCGGTC GGCAGTGA
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Protein sequence | MTKLSSRDRL LRRIADRSAR IGIVGVGYVG LPLAAVFGAA GLRVTGVDAS AERVAAINAG RSYIDDVPTD VVAQLRADGL LDATTDFDVL AELDAISICV PTPLRKTRDP DISAIMAVTE QIAQRLRPGQ VIVLESTTYP GTTREVILPR LEASGLTVGT DYFLAFSPER VDPGRADWTT RNTPKVMGGV TPACLEVARA LYETAIERVV PVSSPEVAEM VKLLENTFRA VNIGLVNEVL LMCDKLGLDV WEVIDAAATK PFGFMKFTPG PGLGGHCIPI DPLYLSWKLK TLNYTARFID LASEVNTEMP RYWVQKVQDA LNDAGRAVKG SRVLVLGVAY KRDVDDVRES PALDIMHLLY EKGAQVTYHD PHVPEVQIEG VRLRCEPDLD AALRAADCVI IVTDHSAYDW QRIARQAWRV VDTRGALRHL ASGRQ
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