| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3067 |
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| Symbol | |
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| ID | 5540563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3971609 |
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| End bp | 3972205 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640895186 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_001433139 |
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| Protein GI | 156743010 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.197605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGGAGG CCTGTATGAA CCTGATCGTG AACAGTCGCA ATGGCAAACT CTCGGATCGT
CAGCGTCAGC ACATCGAGCA AAAACTTTCA CGCCTCGACC GTTACCTTGA TCGGATCGAC
AAAGTGACGG TCGAGCATAT GGAAGAAATG CGACGCAACG AGGGGAATGT CCATCGCGTG
CAGGTGACGG TTGTCGGCGA TCATGGTGTG TTGGTGCGCG CCGAGCGGCG CGCGCCGGAG
TTGTATGCGG CGATTGACGA AGTGTACGAC ACGCTCCAGC GTCAGATCGA GCGTTATAAG
GATAAGCACT GGCGGCGCGG CAGGCTTCGC CGTCAGGGAG GGCAGATTGT CGAGGCGCTG
CCTGAAATGA ACGCCGCAGC GCCTGCCCCA ATCGACGAGG AAGAGCAGCG ACCGCGTATC
GTCCGCACGA AGGAATTCCA GGTCAAGCCG ATGTACAGCG ATGAAGCGGT CGAGCAGATG
GAACTCCTCG GACACAGTTT CTTCATCTTC CAGGATGCTG ATACCGGGAA ACTGAATGTG
CTCTACCGCC GCCAGGACGG GAACTATGGC TTGATCGTGC CAGAAGTGAC TGACTGA
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| Protein sequence | MQEACMNLIV NSRNGKLSDR QRQHIEQKLS RLDRYLDRID KVTVEHMEEM RRNEGNVHRV
QVTVVGDHGV LVRAERRAPE LYAAIDEVYD TLQRQIERYK DKHWRRGRLR RQGGQIVEAL
PEMNAAAPAP IDEEEQRPRI VRTKEFQVKP MYSDEAVEQM ELLGHSFFIF QDADTGKLNV
LYRRQDGNYG LIVPEVTD
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