Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3026 |
Symbol | |
ID | 5540522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3922695 |
End bp | 3923834 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640895146 |
Product | hypothetical protein |
Protein accession | YP_001433099 |
Protein GI | 156742970 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1980] Archaeal fructose 1,6-bisphosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGCGG AATTGACGAT CAGCTGCATC AAGGCTGATG TGGGCGGATT CGTCGGGCAC TCGGCAATCC ATCCGGCGTT GAAGGACGAG GCAGGACGTC AACTGGAAAT CGCGCGCCGT CACGGTCTCT TGATCGATTT TCACGTCACT GCGTGCGGGG ATGACCTGGG GTTGCTCATG ACCCACCGCC TGGGTGTCGA TAACCACGAT ATTCACCGTC TCGCCTGGGA TGTGTTCGAT ATCTGCACCC GCGTGGCGAA GGAACTGAAA CTGTACGGCG CCGGACAGGA CCTGTTGAAG GATGCGTTTT CCGGCAATGT GCGCGGCATG GGTCCGGGCA TCGCCGAGAT GACCATCGTC GAGCGTCTAT CAGAGCCGAT CATTGTGTTC TTTGCCGATA AAACCAGCGC CGGCGCCTGG AACCTGCCGC TCTTCCGTAT GTTTGCCGAT CCGTTCAACA CCGCAGGGCT GGTGATTTCA CCGGCGATGC ACGAAGGGTT TCGCTTCCGT GTGCTCGATG TGCGCAAGGG CGAGACGATC ACCCTGAGCA CACCGGAGGA GATGTACGAT CTCCTCGTCT TCATTGGTGC ACCAGGGCGC TACGTGGTAG AAAGCATAAC GGCAAAGAGC ACCGGCGTCA TCGGTGCGGT GTCGTCTACA CAACGGCTGG CGCTGATTGC CGGGCGCTAC GTCGGGAAGG ACGACCCGGT CTGTATTGTG CGGGCGCAGG GTGAGTTCCC GGCGGTCGGC GAGGTGCTGG AGCCATTCAC GATGCCGCAC ATTGTCGAAG GATGGATGCG TGGATCGCAC TACGGTCCGC TGATGCCCTG CCGCATCGGT GATGCCCATC CGGGGCGCTT CGACGGACCA CCGCGGGTGA TTGCGCTGGG GTTCCAGATC GCTGAGGGGC GGCTGATTGG ACCGCGTGAT ATGTTCGATG ATCCCAGTTT CGATGAGGCG CGTCGTCTGT GCAATGTCAT CGCCGACCAT CTGCGCCGTC ATGGTCCCTT CGAGCCGCAC CGCCTGCCGA TGGAGGAGAT GGAATATACC ACGCTTCCAG AGGTGATGAA GAAACTGGCA GATCGCTGGC AGCCGGTGAA TGGTCACGCG GTCAGCCCGG AGCAGGTGGC ATACCAATGA
|
Protein sequence | MAAELTISCI KADVGGFVGH SAIHPALKDE AGRQLEIARR HGLLIDFHVT ACGDDLGLLM THRLGVDNHD IHRLAWDVFD ICTRVAKELK LYGAGQDLLK DAFSGNVRGM GPGIAEMTIV ERLSEPIIVF FADKTSAGAW NLPLFRMFAD PFNTAGLVIS PAMHEGFRFR VLDVRKGETI TLSTPEEMYD LLVFIGAPGR YVVESITAKS TGVIGAVSST QRLALIAGRY VGKDDPVCIV RAQGEFPAVG EVLEPFTMPH IVEGWMRGSH YGPLMPCRIG DAHPGRFDGP PRVIALGFQI AEGRLIGPRD MFDDPSFDEA RRLCNVIADH LRRHGPFEPH RLPMEEMEYT TLPEVMKKLA DRWQPVNGHA VSPEQVAYQ
|
| |