Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3003 |
Symbol | |
ID | 5540499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3899281 |
End bp | 3899979 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640895125 |
Product | uroporphyrin-III C/tetrapyrrole methyltransferase |
Protein accession | YP_001433078 |
Protein GI | 156742949 |
COG category | [R] General function prediction only |
COG ID | [COG0313] Predicted methyltransferases |
TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.535237 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTACG TTGTCGCCAC TCCAATCGGC AACCTGAGCG ATATCTCGTT GCGGGCGCTG GAAACACTGC GTCTGGCGGA TGTGATTGCG TGCGAAGATA CGCGCAAAAG CGGCATTCTG CTTCAACACT ACGACATTCA CAAACCGCTG ATTTCATTTC ATGAGCACAA CGAACGCGAA GCAGGCGAGC GTCTGATGGG ACTGTTGCGC CAGGGAAAGG CTGTGGCGCT GATCAGCGAC GCCGGCACTC CTGGCATCGC CGATCCGGGG TTCACCCTGG TACGCAGTGC CATCGCTGAA GGCATTGATG TGACCATGAT CCCCGGTCCG ACGGCGTTAA TCATGGCGCT CGTCCTTTCC GGACTGCCGC TCCACAGTTT CACATTTCGC GGCTTCCCAC CGCGCAAACC CGGTCCGCGC CGGCGGTTCC TCGAAATTGA CCGTGACTCG CCACATACGC TCATCTTCTA TGAAAGCCCC TACCGCATCG TGGCGCTCGT GCAGGATGCG CTGGCAGTCT ACGGCGACCG ACCGGCTGCC CTGGCAAACG ATCTGACCAA AAAGTTCGAA CACGTCGAGC GCGGGACGCT CGCGCACCTG CTCACCTACC TGGCATCGGC GCGGGTTCAG GGTGAATATG TGCTGGTCGT CGCCGGCGCC ACTGCACGCA CGGCACATCA GGAAGACGTA GACACCTGA
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Protein sequence | MLYVVATPIG NLSDISLRAL ETLRLADVIA CEDTRKSGIL LQHYDIHKPL ISFHEHNERE AGERLMGLLR QGKAVALISD AGTPGIADPG FTLVRSAIAE GIDVTMIPGP TALIMALVLS GLPLHSFTFR GFPPRKPGPR RRFLEIDRDS PHTLIFYESP YRIVALVQDA LAVYGDRPAA LANDLTKKFE HVERGTLAHL LTYLASARVQ GEYVLVVAGA TARTAHQEDV DT
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