| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2984 |
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| Symbol | |
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| ID | 5540476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3868307 |
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| End bp | 3870895 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640895102 |
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| Product | helicase superfamily protein |
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| Protein accession | YP_001433059 |
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| Protein GI | 156742930 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000404432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00167683 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGTTCCGAA TCGCTATGAC CGATTTTATT GACATCCTGC GCAGCGCGCG CGGTTACAAC
AATCAGATTG TCCATGTCGA GCGGTTACCC GCGCGCGCTG CGCGCTATGC CGAACCGTCC
GCGCCGCTGC CGCCACCGCT TGCCGCAGCG CTCGCTGCGC GCGGTATTTC CCGCCTCTAC
ACGCATCAGG CAGCCGCACT CGATGCCGCG CGCGCCGGGT TGCACGTCGG CATCGTGACA
GCAACGGCAT CAGGGAAAAC GCTCTGTTAC CAGTTGCCGA CCATTGAAGC GACCCTCTCT
GATCCCGCTG CTCGCGCGCT GTTTCTTTTT CCTACCAAGG CGCTTGCCGC CGACCAGTTG
CGCGCGCTGT ACACGCTGCT GGATGCGCTC AAAGCCGCAG GCGGGCCGGC GTTGATGGCA
GCGACGCTCG ATGGCGATAC GCCACGCGCC ACACGCGATC GGGTGCGCGC CGGGGCGTCC
ATTATCCTGT CGAATCCCGA CCTGCTCCAC CGCACGTTAC TGCCCGACCA CGCGCGCTGG
CAGAGCGTTC TGGCGCAGTT GCGCTTTGTC GTCCTCGATG AAGCGCATAC CTATCGCGGC
GTGTTCGGCA CGCACGTCGC GCTGATTATG CGGCGACTGC GGCGGTTGTG CGCCCATTAT
GGCAGCGCAC CACAGTTCAT CTGCTGTTCG GCGACCAGCG CTAATCCACA GCACCATCTG
GCGGCGCTCA TCGGCGATGA AGTGCGGGTG ATCGACGACG ACGGCGCGCC GCAGGGGGAA
CGCACCTTTT TGTTCTGGAA TCCACCGGTG ATCGACAATC AGCGCGTTCC GACGTGGATG
CGCACCCTGC TGCCGGAAAA CGGTCAACGG CGCAGTACGA ACGTCGAAAC GGCGAATGTG
CTGGCGACCC TGGTGCGCGC TGGCGTCAAG ACGCTGGCGT TTGCACGCAC CCGGCGCAGC
GCAGAATTGG TGCTGCGCTA TGCGCGCGAG ACGCTGGATA ACGGCGATTC CGTAGAAAAC
GGTCATAACC CGTCAATGCC GCTTGCTGAA CAGATCGCCG CCTACCGCGC CGGGTATACT
GTCGAGGATC GCCGTCGCCT GGAGCAGGCG TTCGCCCGTG GCGATCTGCG CGGGCTGGTC
TCGACCAATG CGCTGGAGTT GGGGGTTGAT ATTGGCGGCG TTGATGCTGT CGTGATCGGC
GGTTTTCCGG GAACGATCGC CAGCGCCTGG CAACAGGCAG GGCGTGCCGG TCGCGCGCAG
GGGAAAAGCC TGGCAGCGCT CGTGGCGCAG GACGACCCGC TCGATCAGTT CTACATGCGG
CATCCGGCGG AGTTCTTCTG CCGACCACAC GAACACGCCC GAATCGCATT GGATAATCCC
TACATTCTGC GCGATCAGTT ACGTTGCGCC GCTGCGGAAT TGCCGCTGCA CGACGCCGAT
GATCTCTGGT TCGGCGCAAC GTTTGCAAAA CTGCGCGACT GGTTGCTGCA ACGCGGCGAA
GTGACAACGC GACCGGACGG TCGCGCGGCG TATGCTGGCG ATCCTCGTCC CGCCGCACAT
GTGAACATCC GCAGCGCTGA TGGCAACCCG ATCGATTTGA TAGACATTGA CACAGGGCGT
CGTATCGAGC AGATTGCCGC AACCCGCGCG CCGTTCGAGG TCTTTCCCGG CGCGGTCTAC
ATGCATCAGG GCAATACCTA TGTTGTCGAA GCGTTGACAT CCCGGCAGGC GCTGGCGCGG
CGCGCGCAGA TTGAGTACTA CACGCGGACC ATTGACGAAA CCGAGATCGC CGTGCGTCAG
GTGCGCCAGC AACGCCAGGT CGGACCGACG ACTCTCGCGC TAGGGGTGGT GGACGTGACC
CGGCAGGTCG TCGGTTACAA ACGCAAGAAA CATTACACCG ACGACGTGAT CAGTGAGCAC
GAGTTGACCA TGCCGCCGCA AACGTTTCGC ACGATTGCGG TCTGGTGGAC CATTTCCGAC
TCCGCTTGCC GCCAGATTGC GCAGGTGTGC GATAGTGTAC TCGATGCGTT GCATGCGATG
GAGCACGCCG TCATCGGGCT ACTGCCGCTC TTCGCGCAGT GCGACCGCGC CGACATCGGC
GGTCTTTCGA CCGATGCGCA TCCCGACACT GGCGCCGCCA CAATCTTCGT CTACGATGGT
GTGCCGGGAG GGGTGGGCAT TGCCGAAGTC GGGTACGAGC AGGCGGCGCA GTGGTGGGAG
CAGACGTGGC GGCTCCTGGT CGACTGTCCG TGTAGTGAGG GCTGCCCGGC GTGCATTCAG
TCGCCGAAGT GTGGGAACGC CAACCAACAC CTGTCGAAGA TTGGCGCGGC AACGCTCGCG
GCGCTGCTGA CCGGGCATGC GCCGCCGCTG CCAGACGCTT TCGGCAGACA TGCGACGAGC
GCAGCGTTCA TCGAAGAGAT GCAACAACAG TTGGCGCGCG CGCGCAGCGA ACCGCCGGGG
GTGCGCCGCA CCGCCGTGCT GGTAGCGCTG CGCTATCGGA TCGCAACCGC GCGCGCGTCC
ATCACCGATG ACACCGGCAG AGCGACGCTG GCGATGATCG AAGCGGAAGC GAATGCGCTG
CAACGATAA
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| Protein sequence | MFRIAMTDFI DILRSARGYN NQIVHVERLP ARAARYAEPS APLPPPLAAA LAARGISRLY
THQAAALDAA RAGLHVGIVT ATASGKTLCY QLPTIEATLS DPAARALFLF PTKALAADQL
RALYTLLDAL KAAGGPALMA ATLDGDTPRA TRDRVRAGAS IILSNPDLLH RTLLPDHARW
QSVLAQLRFV VLDEAHTYRG VFGTHVALIM RRLRRLCAHY GSAPQFICCS ATSANPQHHL
AALIGDEVRV IDDDGAPQGE RTFLFWNPPV IDNQRVPTWM RTLLPENGQR RSTNVETANV
LATLVRAGVK TLAFARTRRS AELVLRYARE TLDNGDSVEN GHNPSMPLAE QIAAYRAGYT
VEDRRRLEQA FARGDLRGLV STNALELGVD IGGVDAVVIG GFPGTIASAW QQAGRAGRAQ
GKSLAALVAQ DDPLDQFYMR HPAEFFCRPH EHARIALDNP YILRDQLRCA AAELPLHDAD
DLWFGATFAK LRDWLLQRGE VTTRPDGRAA YAGDPRPAAH VNIRSADGNP IDLIDIDTGR
RIEQIAATRA PFEVFPGAVY MHQGNTYVVE ALTSRQALAR RAQIEYYTRT IDETEIAVRQ
VRQQRQVGPT TLALGVVDVT RQVVGYKRKK HYTDDVISEH ELTMPPQTFR TIAVWWTISD
SACRQIAQVC DSVLDALHAM EHAVIGLLPL FAQCDRADIG GLSTDAHPDT GAATIFVYDG
VPGGVGIAEV GYEQAAQWWE QTWRLLVDCP CSEGCPACIQ SPKCGNANQH LSKIGAATLA
ALLTGHAPPL PDAFGRHATS AAFIEEMQQQ LARARSEPPG VRRTAVLVAL RYRIATARAS
ITDDTGRATL AMIEAEANAL QR
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