| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2982 |
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| Symbol | |
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| ID | 5540474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3866003 |
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| End bp | 3866596 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895100 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_001433057 |
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| Protein GI | 156742928 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0335697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000767579 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGGCGTA GTCTTCGAAT GGCGCTGTTG ATCGCGTTTG CCATCATTGT CAGCGCATGT
GGCAGGTATG AGTTTCGTGG CGTAACGCTC GATCCGCCGA AAGAGGCGCC CGATTTTACC
CTGACCGATT TTGATGGGAA ACCATTTCAT CTGAGCGATC ATCGCGGCAA AGTGGTGATT
CTGTTCTTTG GCTTTACCAA CTGCCCCGAC ATGTGCCCGG CTGCGCTTTC CGACATGGCG
GCTGCTCGCC GCAAATTGGG CGCCGACGCG GAGAAGGTGC AGGGTGTCTT TGTCTCGCTC
GACCCAGACC GTGACACGCC GGAACGCTTG AAGCGGTACG TGACGGCGTT CGACCCGACG
TTCATTGGAG TGCGCGGCAG CGAGACAGAA CTTGCGCCGG CCGTCAAGGA CTATGGCGTC
ACCTACATGC GACGCGAGTT GCCCGGATCG GCGCTCGGAT ACACCATCGA TCACTCGACG
TTCATCTACG TGATCGATGC CGCCGGGCGC TGGCGCCTGC TGTTCACCCA TGGGATGCCG
GTCGATGACA TTGTCAGCGA TCTGCGATAC CTTGTGCGAC GCGGAGGCGC CTGA
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| Protein sequence | MRRSLRMALL IAFAIIVSAC GRYEFRGVTL DPPKEAPDFT LTDFDGKPFH LSDHRGKVVI
LFFGFTNCPD MCPAALSDMA AARRKLGADA EKVQGVFVSL DPDRDTPERL KRYVTAFDPT
FIGVRGSETE LAPAVKDYGV TYMRRELPGS ALGYTIDHST FIYVIDAAGR WRLLFTHGMP
VDDIVSDLRY LVRRGGA
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