| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2975 |
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| Symbol | |
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| ID | 5540467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3858579 |
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| End bp | 3860228 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895093 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001433050 |
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| Protein GI | 156742921 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.024758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000748304 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAACGAA CGTGGGGCAG TGTTCCTTTC CTGAGACCGT TGATATTGTT CGTCATTGGC
GGCGTGCTGG GAACGCTTGT CGCCTATGAT CCTGTCGTAA GTCTGGCGTG GCTGGCGCCC
ATGATCGCAG GAGCGGCATT GTACCTCAGT ATGATGACCG TCCTGCGCCA TCGATTGGCG
ATTATTGCTC TGGTTCTGGC GTTCTGGAGC ATCGGTTACA GCGTCTTGCT GGCGACGCAG
TATCGGTATC TGGGGTTCGA TGAGAAACTG GGGCTCGCCA TATGGCTTGG ACGCCTGTTC
AGTTCGCCTT TCCCGGATGT GACGCCGGCG TTCATCGATG CCAATGCTGC GGCATCGTTC
CTGGCGCCGG CGATACCGCT TATCATCGGG CTGGCATGGA CCGCGCGCGG CGTCTGTCGC
GTAGCATGGG GCATTGCCGC CGGTAGTGTT GCCTTTGGCG TGTTGCTCAC ATCTTCACGC
GGTGCGTTCG TTGCACTGGC GGCGGCAGGA CTCTTCTGGC TTCTGGTGCG CGTGCAGGCG
TCTGCACATC AATCTGGCGC CCATATGCCT CGCTTCGACC TGCGGAGCGC CATCGTTGCC
GGCGCCGTCA TAGCCGGGGT GGTCGCTGGC GGACTTCTGC TGGTCTGGCA TCCGCTGACG
CAGGACGCCC TCGCATCGGC GATGCTGCGC GCCGAGGATC GGCTGGCAGT CTATCGCAAT
AGCCTGTTTC TGGCGCTCGA TTTTCCGTTC AGCGGCATTG GACCGGGGGC AGTGTTCGGG
CAGATGTACT CGCGCTTTCA GTTGCTCATC ATTCCCACCT ACATCGGTTA TGCGCACAAT
CTGTTCCTCG GCGTCTGGCT GGCGCAGGGC ATCATCGGGC TGATCGGCTT TCTCTGGTTG
CTCATCGCGT CGTTGCATCG CATTGCGCCG ACGCTCCATA CGCAATCTCC GCTGACACAG
GGGGCGGCAA TCGGGTGCGT TGCGCTGCTG TTTCATGGGT TGACCGACGC GCCGCAGTAC
GCTACATCCT GGGCGACCCT GATCCTGGCA TTTGGACTCT TTGGCATGAC TGCCGCTACC
TGCCGTCCAA CAGAGGCGCT ATTGCTCGCT GTTGCGCCTG CAACAAAACG GCACAGCATT
TGTTCGTGGG TCGTCGCTAT TGCAGGAGTC ATTGGGCTGA CATTGAGCGC GCCCCATCTT
GCGGCTGCGG GTGCGGGCAA CATTGCCGCA GGGTTCCAGG CGCGCGCCAT GCTCGCCGAA
GGGTTGACGC AAGAGGAACG CGCCGCGTTG ATGCACGAGT CGGTCGTCTG GGTCAATCAT
GGGCTGCGCA TAGCGCCAGA TTCGCCGCTG ATCCAGAAGC GGCTAGGCAT GCTGGCGCTC
GATCTGGGGG ATTATCCACG CGCGATCAGT GCCCTCGAGC GCGCACAACC ATTGCTTGCC
GATGATCAGG CGGTATGCAA GGCGCTTGGC ATGGCGTATG TGTGGACCGG CGATCCCGAC
CATGGCGCCG AAATCCTGGC GCACCTCGAC TATGCCGATG AGGTGCGCGA AGAACTGGGC
ATCTGGGTGT ATGCCTGGCA GGAGCGGGGG CGCGACGATC TCGCCGCTTA TGCGCAACGC
GCCGCGCAGG CAATGGCGGC AATTCACTGA
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| Protein sequence | MKRTWGSVPF LRPLILFVIG GVLGTLVAYD PVVSLAWLAP MIAGAALYLS MMTVLRHRLA
IIALVLAFWS IGYSVLLATQ YRYLGFDEKL GLAIWLGRLF SSPFPDVTPA FIDANAAASF
LAPAIPLIIG LAWTARGVCR VAWGIAAGSV AFGVLLTSSR GAFVALAAAG LFWLLVRVQA
SAHQSGAHMP RFDLRSAIVA GAVIAGVVAG GLLLVWHPLT QDALASAMLR AEDRLAVYRN
SLFLALDFPF SGIGPGAVFG QMYSRFQLLI IPTYIGYAHN LFLGVWLAQG IIGLIGFLWL
LIASLHRIAP TLHTQSPLTQ GAAIGCVALL FHGLTDAPQY ATSWATLILA FGLFGMTAAT
CRPTEALLLA VAPATKRHSI CSWVVAIAGV IGLTLSAPHL AAAGAGNIAA GFQARAMLAE
GLTQEERAAL MHESVVWVNH GLRIAPDSPL IQKRLGMLAL DLGDYPRAIS ALERAQPLLA
DDQAVCKALG MAYVWTGDPD HGAEILAHLD YADEVREELG IWVYAWQERG RDDLAAYAQR
AAQAMAAIH
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