| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2969 |
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| Symbol | |
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| ID | 5540460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3852395 |
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| End bp | 3854119 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640895088 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433046 |
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| Protein GI | 156742917 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.070385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000379477 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTCGAC ACTTCCGCTC TTGCTTACCC GGATTATACA CCGGCATCGC GCGATTGCAT
CAGCACACCA TGCTTGCCAC AAGTCTCGTG TGTATTGCCT TGATTCTGAC GATTGCAGGC
GCAACATCAG TGCGCGCTGT GTACACCAGC CCGACCGGCG GACCGGTGAC GATGTCTCCT
TCACCAGGGG CAGGCGCTGC GACGCCATAC CCCTCGACGA TCGACGTCAG CGGGTTGAGC
GGTTCGATTG TGAGCGTCGT GGTGCGACTG AATGGCTTGT CGCACGCCTT TCCCGACGAT
CTTGACATTG TTCTGGTCGG TCCGTCCGGT CAGGCGGTCA TGCTTATGTC CGATGTCGGC
GGCGCGACCC CGATAACCAA CGTAAATCTT GTCTTTAGCG CAAGCGCGAC AGCCAACCTT
CCCGATGCCG GTCCAATCAC CAGCGGAACC TATCGACCGA CGAACATCGG TGGAAACGAC
ACGATGCCTT CCCACCCGAA TCTGCCTGCA GGACCGTATG GAACGGCGCT GTCGGTGTAC
AATCTGGCAA ATCCCAACGG CATCTGGCAC CTGTACGTTG CCGAAGATGA CAGCGGTTCG
AGTGGTTCGC TGACGTCCTG GCAACTCGAG ATTGTGACGA TCGACCTTCA GGCAACGCTT
ACTTCTGTTC CATCCTCGGT GAACGCCGGT GATCCGCTGA ACTACAACAT CACAGTAACC
AATGCAGGCA CCGATCCGGT GGCAAATGTC ACCCTGACCA GCGCCATTCC TGCCAACACC
GCCTTCAGTC TGGTGACGCC GCCTGCCGGC TGGACCTGCC CTCCGCCGGC GGCTGGTGCG
TCGACGTTCA GTTGCACGGC TGCTTCCGTT GCAGTTGGCA GCGCAACCTT CACTGTGCAA
TTGAATGTCG ATCCGGCAAC TGCGCCGGGC ACGACATTGC CGCTCTCTAC AACCATTTCA
TCCGCCACAC CCGAAGCCAA TACGGAGAAT AACACGTCAT CCGCTACGGT TACTGTCACC
ACTTCAGCGA ATCTGGAGGT TGTGACGCTG ACGGCGCCCG CCAGCGTCAA TGCCGGTGAG
AACGTTGAGT CCGTCACAAC GGTGCGCAAC AATGGTCCCA GTTTTGCCGC CAATGCCAGC
GTATCACTGC CGCTCGACAC AGATACGACG TTTGTGGCGC TGACATCGCC CGACGGCTGG
AACTGCACTA CTCCCAACGT CGGCAAGACC GGCACAGTGA CATGCACCAT CGCAACCTTT
ACCGTAACCA GTGTGGAATT CCGCCTGACG GTGCGGGTGA AACCCGACGT CGCTCCGGGT
GCGACGGTTG ACAGCACAGC AACCATTGCA TCAGAGACCA CCGATCCGAA TACCGCCAAT
AATACCAGAC AGGCGACCAC GAACATTACC ACTCTCGCCG ATCTGGCGCT GACCGTCTCG
GATGAGCCTG ATCCGGTCAG CGCCGGCGCC CAACTAAGCT ACACGATTGT CGCCACGAAC
AACGGGCCGA GCAACGCCAG CTCGTCACGA CGACGACCTC TATTCCCACC AATACCACCT
TCGTCTCGCT TGCCGCACCG GATGGATGGA ACTGCACGAC GCCAGGCGTC GGCGACATCG
GTGCAATCAC GTGCACCAGG CCCGGTTTCG GCCTTGGTAA TGCAACTTTT ACCCTGCGCG
TCCGGGTCAA GCAGGGCACA CCCGTCAGCA CGACCCTGTC GTTGA
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| Protein sequence | MLRHFRSCLP GLYTGIARLH QHTMLATSLV CIALILTIAG ATSVRAVYTS PTGGPVTMSP
SPGAGAATPY PSTIDVSGLS GSIVSVVVRL NGLSHAFPDD LDIVLVGPSG QAVMLMSDVG
GATPITNVNL VFSASATANL PDAGPITSGT YRPTNIGGND TMPSHPNLPA GPYGTALSVY
NLANPNGIWH LYVAEDDSGS SGSLTSWQLE IVTIDLQATL TSVPSSVNAG DPLNYNITVT
NAGTDPVANV TLTSAIPANT AFSLVTPPAG WTCPPPAAGA STFSCTAASV AVGSATFTVQ
LNVDPATAPG TTLPLSTTIS SATPEANTEN NTSSATVTVT TSANLEVVTL TAPASVNAGE
NVESVTTVRN NGPSFAANAS VSLPLDTDTT FVALTSPDGW NCTTPNVGKT GTVTCTIATF
TVTSVEFRLT VRVKPDVAPG ATVDSTATIA SETTDPNTAN NTRQATTNIT TLADLALTVS
DEPDPVSAGA QLSYTIVATN NGPSNASSSR RRPLFPPIPP SSRLPHRMDG TARRQASATS
VQSRAPGPVS ALVMQLLPCA SGSSRAHPSA RPCR
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