Gene Rcas_2910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2910 
Symbol 
ID5540400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3772024 
End bp3772821 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content63% 
IMG OID640895031 
Producthypothetical protein 
Protein accessionYP_001432990 
Protein GI156742861 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.308542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTAG CAGCGCCTGA GACAAAACCG ACGATCATCT ATCCCGAAAG CGATGGGCAA 
CCAATGGCGG ACAACACGTT GCAGTTTCGC TGGATTGTTG TGGTGCAGGG GAATCTGGCT
GCACTCTTTG CCGACCGACC GGATGTTTTC GTGGCGGGTG ATCTGTTATG GTATCCGGTG
GAAGGGCGCC CCGACATTCG CCGCGCGCCG GATGTTATGG TTGCCATCGG GCGGCCCAAA
GGGGATCGCG GCGCATATCT TCAGTGGGAA GAGGGCGGAC AGCCGCCGCA GGTGGTCTTT
GAAATACTGT CTCCTAGCAA CACATTCAGT GAAATGGCGC GCAAACTTGA GTTTTACGAG
CGCTACGGCG TCAGCGAGTA TTATGTGATC GACCCGCAGC ACGGCGATGT GGCCGGTTGG
ATGCGTCAGG GTGAGCGGCT GCATGTCATT GATGACATGA ATGGATGGTC CAGTCCGCTT
TTGGGAGTCC GATTTGCCGT GACGGAAGAA GGTGTCACCC TCTTCTATCC AGATGGTCGT
CCATTTCTGA CCTTTGAGGA AGTGGTGCGG GCGCGCGCCG AGGCGGAGGA GCGCGCGCAG
CGCGAAGCGG ATCGCGCGCA GCAGGAGGCA GCGGCGCGGG CGGAAGCCGA AGCGCGGGCG
GCGGCGGAGG CGGCGGCGCG GGCGGAAGCC GAAGCGCGGG CGGCGGCGGA GGCGGCGGCG
CGGGCAGAAG CGGAAGAACG TCTCCGCGCG CTCGAGGCGG AACTGCGCCG TTTGCGCGGT
TCGTCACAGA CGGAATGA
 
Protein sequence
MSVAAPETKP TIIYPESDGQ PMADNTLQFR WIVVVQGNLA ALFADRPDVF VAGDLLWYPV 
EGRPDIRRAP DVMVAIGRPK GDRGAYLQWE EGGQPPQVVF EILSPSNTFS EMARKLEFYE
RYGVSEYYVI DPQHGDVAGW MRQGERLHVI DDMNGWSSPL LGVRFAVTEE GVTLFYPDGR
PFLTFEEVVR ARAEAEERAQ READRAQQEA AARAEAEARA AAEAAARAEA EARAAAEAAA
RAEAEERLRA LEAELRRLRG SSQTE