Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2910 |
Symbol | |
ID | 5540400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3772024 |
End bp | 3772821 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640895031 |
Product | hypothetical protein |
Protein accession | YP_001432990 |
Protein GI | 156742861 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.308542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGTAG CAGCGCCTGA GACAAAACCG ACGATCATCT ATCCCGAAAG CGATGGGCAA CCAATGGCGG ACAACACGTT GCAGTTTCGC TGGATTGTTG TGGTGCAGGG GAATCTGGCT GCACTCTTTG CCGACCGACC GGATGTTTTC GTGGCGGGTG ATCTGTTATG GTATCCGGTG GAAGGGCGCC CCGACATTCG CCGCGCGCCG GATGTTATGG TTGCCATCGG GCGGCCCAAA GGGGATCGCG GCGCATATCT TCAGTGGGAA GAGGGCGGAC AGCCGCCGCA GGTGGTCTTT GAAATACTGT CTCCTAGCAA CACATTCAGT GAAATGGCGC GCAAACTTGA GTTTTACGAG CGCTACGGCG TCAGCGAGTA TTATGTGATC GACCCGCAGC ACGGCGATGT GGCCGGTTGG ATGCGTCAGG GTGAGCGGCT GCATGTCATT GATGACATGA ATGGATGGTC CAGTCCGCTT TTGGGAGTCC GATTTGCCGT GACGGAAGAA GGTGTCACCC TCTTCTATCC AGATGGTCGT CCATTTCTGA CCTTTGAGGA AGTGGTGCGG GCGCGCGCCG AGGCGGAGGA GCGCGCGCAG CGCGAAGCGG ATCGCGCGCA GCAGGAGGCA GCGGCGCGGG CGGAAGCCGA AGCGCGGGCG GCGGCGGAGG CGGCGGCGCG GGCGGAAGCC GAAGCGCGGG CGGCGGCGGA GGCGGCGGCG CGGGCAGAAG CGGAAGAACG TCTCCGCGCG CTCGAGGCGG AACTGCGCCG TTTGCGCGGT TCGTCACAGA CGGAATGA
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Protein sequence | MSVAAPETKP TIIYPESDGQ PMADNTLQFR WIVVVQGNLA ALFADRPDVF VAGDLLWYPV EGRPDIRRAP DVMVAIGRPK GDRGAYLQWE EGGQPPQVVF EILSPSNTFS EMARKLEFYE RYGVSEYYVI DPQHGDVAGW MRQGERLHVI DDMNGWSSPL LGVRFAVTEE GVTLFYPDGR PFLTFEEVVR ARAEAEERAQ READRAQQEA AARAEAEARA AAEAAARAEA EARAAAEAAA RAEAEERLRA LEAELRRLRG SSQTE
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