Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2900 |
Symbol | |
ID | 5540390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3761205 |
End bp | 3762386 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640895021 |
Product | exodeoxyribonuclease VII, large subunit |
Protein accession | YP_001432980 |
Protein GI | 156742851 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1570] Exonuclease VII, large subunit |
TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTGC TGACCGTTTC TCAACTCAAC ATGTACCTGC GCGACCTGCT CGATGCCGAT GATCTGCTCC GTGACGTGTG GGTCGAAGGG GAAATTTCGA GTTTCAGCCG TCACTTTTCC GGTCATTGCT ACTTTACGCT GAAAGAAGGC GAAGCACAGA TCGGCGCGGT GATGTGGAAG TCGGTCGCTG CACGTCTGGC GGCTCTGCCG GCCAACGGCG AAGCGGTGCT TGCCCATGGG CGTGTGGCAT TCTATGAGGT GCGCGGTCAG GTTCAACTCT ACGTCGATAC GCTGCGACCG GCAGGCATCG GGCTGTTGCA GGCGCAGTTC GAGCGCCTGA AGGAGCGCCT CGCTGCCGAA GGTCTGTTCG ACCCGTCGCG GAAACGTCCG CTGCCGCTCC TGCCGCACCG CATTGGTATC GTGACATCCC CCACCGGTGC GGCGCTCCAG GATGTGCTCA ACATTCTGCG TCGCCGTTAT CCGCTCGCCG AGATTGTCTT CGCGCCGTGC CGGGTGCAGG GCGCAGGCGC CGCTGAGACG ATCATCAATG CGTTGTATGC CCTGTACGAA ACCAATGTGG ACGTCATCAT CGTGGCACGC GGCGGCGGCG GCGCCGAGGA CCTCTGGACG TTCAACGACG AACAGGTGGC GCGCGCTGTG TTTGCCAGCC CGGTTCCGGT TGTGAGCGGA GTAGGACACG AAACCGACAC GACCCTGATC GACTTTGTCG CTGATGTGCG CGCGCCTACC CCCTCCGCTG CTGCGGAACT GGTATCTCCC GATATTGTGG CGCTAACCGA CGATATTGCC CATATGCGCA ACCGTCTGGA GGCTGCGATG ACGCAACGCC TGGCAAACGC GCGCGAAACG ATTGATCGCC TGAAACTACG CCTGAGTCTA CGGTCGCCGG AGAGCCGCAT CCGTCGTGAC CGTCAACATA TCGATGAACT TCTGCGCCGC GCGACGTCAA CGCTGGAGCG TCGTCTCATC CTGGCACGCA CTCGTCTTGA TGGCGCGCGC GGGCGGCTCG AAGCCCTCAG CCCGCTGGCG ACACTCGCAC GTGGTTACGC CATTGTTCAA TCGCCCACGG GGACGCTGAT CACCGAGGCT GCACAGGTCG CGCCTGATGA TCGCATTGAG ATCATTGTGC GACGGGGGCG TTTCCACGCT CACGTGGAGT AA
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Protein sequence | MQLLTVSQLN MYLRDLLDAD DLLRDVWVEG EISSFSRHFS GHCYFTLKEG EAQIGAVMWK SVAARLAALP ANGEAVLAHG RVAFYEVRGQ VQLYVDTLRP AGIGLLQAQF ERLKERLAAE GLFDPSRKRP LPLLPHRIGI VTSPTGAALQ DVLNILRRRY PLAEIVFAPC RVQGAGAAET IINALYALYE TNVDVIIVAR GGGGAEDLWT FNDEQVARAV FASPVPVVSG VGHETDTTLI DFVADVRAPT PSAAAELVSP DIVALTDDIA HMRNRLEAAM TQRLANARET IDRLKLRLSL RSPESRIRRD RQHIDELLRR ATSTLERRLI LARTRLDGAR GRLEALSPLA TLARGYAIVQ SPTGTLITEA AQVAPDDRIE IIVRRGRFHA HVE
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