| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2878 |
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| Symbol | |
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| ID | 5540367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3726715 |
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| End bp | 3728388 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894998 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001432958 |
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| Protein GI | 156742829 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCATG CGGTACGTTG TGAGGAGGAG CCTGCAATGA CCACTCTGGA TGTCGAGACG
CTCGATATGG TTCTGTCGAC GCTGCGCGAA TACGCTGAAC GGAAACTGAC GCCTGAATAT
CTCCGCCATC TCGATCATAA CGACGAATTC CCCGCTGAAG TGCTGAAAGA CCTGTACGAT
CCCAACAAAC TTGGCATTCA CCTGCTGTTC ATTCCCGAAG AGTACGGCGG TTTGGGCGGC
GGGGCATATG ATATTTATCG TGTGTCGGAA GCGATGGCTG CCATCGACCT TGGCATTGCG
ACCGGCGTTC TGGCGACGTT CCTCGGCACC GATCCGATCA CCGTCGGCGG TACCGAGGAG
CAGAAAAAAT ACTGGATGGG GCGCATTGCC GAGGAAGGGT TGCTGGTGGC ATACGGCGCC
ACCGAGCCGC AGGCCGGCTC CGACCTCGCA ACGCTGACAA CCAAAGCCGT GCCGGTGGTC
GAGGACGGCA AGGTGATCGG GTACAAGATC AGCGGGCGTA AGCAGTGGAT CTCGAACGGC
GGCGTCGCCA AAATCTATAC GATCCTGGCG AACGCGCCCG GCGGCATCTC CTGGTTTATC
GTTGAGCACG ACGCCCCCGG CTTCACCAAA GGCAAACCGG AAGACAAACA TGGCATCCGC
GCCTCGAATA CCGCAGCGCT GTTCCTCGAT GAAGTCTTCG TCCCTGCCGA CCGGTTGGTT
GGCGGCGTGG AAGGCAAAGG ACTGGCGCAG GCAGCGGCAG TCTTCGGCTA TACCCGCCTG
ATGGTTGGAT CGTTTGGTCT TGGCGCCGGA TGGGAGGCGA TGCGCCGCGC CATTCGCTAT
GCGCAAACGC GCATTCAGGG TGGAAAGCCG CTCAGCCAGC AGCAGGGGCT GACGCATAAA
CTGATTGTGC CGAACGTTGC TCGCCTTGAA GCGGCGCGCC ATTATATCGA GTGGGTCGCC
GAAACGATCG ATGGCGGCAA TGATCAGCAG CAGACCGAAG GCGCAGTGGC GAAGTATATG
GCGACGGAGG CAGGGAATAA GGCTGCCGAA GACGCCATTC AAGTCCACGG CGGGTATGGC
TACACCAAAG AGTACATGGT CGAGAAGATC AAGCGCGATG TGCGCATTAC CTGCATCTAT
GAGGGCACAT CTGAGATCAT GGAGTGGACG ATTGCCCGCG ACCGCTGGCA GTTCCATCTG
AAGACGAAGG GCGCCTACTA CCACGATTGG GCGGCGCGCG TTGAGCAGGT GCATCAGCGT
GAACCGAACA ATGGCGCGAA TGTCGCGGCA CTGGCGATGC ATGCGCTGGC GAATGTGCTC
GAGCGCGCGC GTATCGACCG CCTGACGCGC AATCAGCATA TTCTGTTCCG CCTCGGCGAA
CTGATCGCCT GGGCTGAGAC CGCAGCGATC TTCAGCGAAC GGGTGAGCAG CAAGCCGACG
GTCGCCTCTG GTCTTGATCT GCCGACTGAA CAGGCGCTGG CGCGCATTTT CGCGCGCATG
GCCGCCTACA AGGTCGCCAC CGACGGACTC GCCTGGTTGA TCGGCGCCGG TCAGACCGAC
CCGAACCTGG CGAATACGCT CAACCTGCCC GCCATCTTTG CCGCACAGGC CGGGCAGATC
GCAGATATGG ATTTTGTCGC GGCGAAATTG GTCGAGGCAT TCCCGGCAGC CTGA
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| Protein sequence | MSHAVRCEEE PAMTTLDVET LDMVLSTLRE YAERKLTPEY LRHLDHNDEF PAEVLKDLYD
PNKLGIHLLF IPEEYGGLGG GAYDIYRVSE AMAAIDLGIA TGVLATFLGT DPITVGGTEE
QKKYWMGRIA EEGLLVAYGA TEPQAGSDLA TLTTKAVPVV EDGKVIGYKI SGRKQWISNG
GVAKIYTILA NAPGGISWFI VEHDAPGFTK GKPEDKHGIR ASNTAALFLD EVFVPADRLV
GGVEGKGLAQ AAAVFGYTRL MVGSFGLGAG WEAMRRAIRY AQTRIQGGKP LSQQQGLTHK
LIVPNVARLE AARHYIEWVA ETIDGGNDQQ QTEGAVAKYM ATEAGNKAAE DAIQVHGGYG
YTKEYMVEKI KRDVRITCIY EGTSEIMEWT IARDRWQFHL KTKGAYYHDW AARVEQVHQR
EPNNGANVAA LAMHALANVL ERARIDRLTR NQHILFRLGE LIAWAETAAI FSERVSSKPT
VASGLDLPTE QALARIFARM AAYKVATDGL AWLIGAGQTD PNLANTLNLP AIFAAQAGQI
ADMDFVAAKL VEAFPAA
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