| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2857 |
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| Symbol | |
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| ID | 5540346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3709080 |
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| End bp | 3710528 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894984 |
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| Product | peptidase S41 |
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| Protein accession | YP_001432944 |
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| Protein GI | 156742815 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACTC GTTGTCTCCG CTTCGTGAGT GCGCTGCTCG TCGTCGTGCT GGCGGGATGC
GGCAACCTGC CCGTTCCGTT GGGTTCGATG TCGACCACAA CGCCCACCCC TCTTCCAACA
GCGACGTCGC AGCCAACGGT CGCGCCAACC GACACACCAC GCCCGACGCC TCCTGCAACG
GCAACGCCAA CCCTTGCCCC CACTGCAACG CCGACAGTCA CGCCATACCC GCTCCTGCCC
ACCCCCACGC TTGCGCCGCT AAGCGCAAAC GAGCGTCAGG CGGTTTTCGA AGATGTCTGG
ACACTGGTGC GCGACCGGTA TGTGTACGAG GACTATGGCG GCGTCGATTG GGACGCGGTG
CGTGCTGAAT TTGAGCCGCG CATTGCCCGC GCCGCTTCGG AAGCGGAGTT CTATGCGCTT
ATCGAAGAAA TGATCGGGCG GCTTGGCGAT GATCATACGC GCTTCGACAC GCCCCAGGAA
GTAGCGGAAG AAGCAGCGCG TTTCGACGGC GGCGTGGCAT ATGCCGGCAT TGGCGCCATG
ATCCGCGATC TGGAAGAAGG GATTCTGATC ACCCGTCTCG CTCCTGGCGG ACCGGCGGAG
CAGGCAGGGC TTCAGCCGCG CGACCTGATC ATTGCCGTCA ATGGCGTGCC GGTCAGCGAC
ACCATCACCT TTGGTCCTGG CGGTCCGGTC TCGGTGGTGC GCGGACAACC CGGAACGCCG
GTGCAACTCC GGATCATCGA CGCCGCCGGC GCCACACGCG ATGTGACGGT CATTCGCCAG
ATCATCCCTC CCGATGCATT CCCGATTGTC GAGGCGCGCC GCGTGCCGGG AACCGATATT
GGCGTGGTGC TGATCGATAC ATTCAATGTC TCAGCGCTCG ATGAGCGCGT AACCGACGCC
ATTATGTCGC TCTATCAATC TGGTCCGCTT GATGGGCTGA TTCTGGATGT GCGCACCAAC
GGCGGGGGAC GCCTCGATAT GCTGCGGCGC ACGCTTGGAT TGTTCCTCGA TGGGGGGACA
ATCGGCAGCA GCAGCGGACG CGAGCGATCA TTCAGCATCG ACGTGCCTTC TGGCAAGACG
TTGCCACTGC TCGAGCAGAT GCCGATTGTG GTATTGACCA GTGATGAAAC CGCCAGCGCC
GCCGAAATGT TTGCAGCCGG CTTGCAATTC CGTGGACGGG CGCGAGTGGT CGGTACGCCA
AGCGCGGGCA ATACCGAGAA TCTGATCGGG TATGATCTCG ATGACGGTTC ACGCTTCTGG
CTGGCAGAAC TGGTCTTCCG CCTGCCTGAT GGATCGTTGC TCGAAGGGCG CGGCGTCCAG
CCGGATCGGA TCGTCGAGAT TGACTGGTGG CGCTACGCAT TCGAGGACGA TCCGCAGATA
CATGCAGCGG TCGAGGAACT CCAGCTTGTC GGTCGATCAA ATGACGTTGC AGAGGTGGTC
GAACGTTGA
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| Protein sequence | MMTRCLRFVS ALLVVVLAGC GNLPVPLGSM STTTPTPLPT ATSQPTVAPT DTPRPTPPAT
ATPTLAPTAT PTVTPYPLLP TPTLAPLSAN ERQAVFEDVW TLVRDRYVYE DYGGVDWDAV
RAEFEPRIAR AASEAEFYAL IEEMIGRLGD DHTRFDTPQE VAEEAARFDG GVAYAGIGAM
IRDLEEGILI TRLAPGGPAE QAGLQPRDLI IAVNGVPVSD TITFGPGGPV SVVRGQPGTP
VQLRIIDAAG ATRDVTVIRQ IIPPDAFPIV EARRVPGTDI GVVLIDTFNV SALDERVTDA
IMSLYQSGPL DGLILDVRTN GGGRLDMLRR TLGLFLDGGT IGSSSGRERS FSIDVPSGKT
LPLLEQMPIV VLTSDETASA AEMFAAGLQF RGRARVVGTP SAGNTENLIG YDLDDGSRFW
LAELVFRLPD GSLLEGRGVQ PDRIVEIDWW RYAFEDDPQI HAAVEELQLV GRSNDVAEVV
ER
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