| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2838 |
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| Symbol | |
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| ID | 5540327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3679327 |
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| End bp | 3680187 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640894967 |
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| Product | ornithine carbamoyltransferase |
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| Protein accession | YP_001432927 |
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| Protein GI | 156742798 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000365648 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGATG CCCAAACAAC ACAATCGCTC CGTGTCGTCG GGGGTGAGCG CCGCCGTTCT
CTCGGTTCGC TGGCGCTCGG CATGCACACC GTCCTGACAC TGGCGTTCCT CTATGCGCCC
ATCGTGGTGC TGGTGCTCTT CTCATTCACG CGCGACAGTT TCGGCGTGCG CTGGACGGGG
TTCACCTTCG ATTGGTATGC GCGGCTGCTT GCCGATCAGC GCCTGCTCAC AGCGGCGATG
AACACCCTCA TTGTGGCGCT GGTATCGACT GTGGTTTCGA CGATTATTGG AACGATGACT
GCGCTGGCGA TGGAGCGCTA CCGCTTTCGC TGGCGCACCG GTTTCGACGC GCTCCTCTAT
CTGCCTATCG TTATCCCGGA GATCGTGATG GCGCTGGCGC TGCTGGCGTT CTTCGCTTTC
TCCTTTGGGC TGCTCGAAAC CTTGTTCGGT ATCCGTTTGC AGTTTGGTCT GGCGACGGTT
ACTATTGCGC ATATCGCTTT CACGATTTCA TTCGTGGTCG TTGTCGTGCG CGCCAGTCTC
AAGGGGTTCG ACATGCGTCT GGAAGAAGCG GCGCAGGACC TTGGCGCAAA TGAGTGGCAG
ACGTTTCGCT ATATTACGCT GCCGCTCATC ATGCCGGGTG TGATCGGCGG AGCGCTGCTC
GCGTTTACCC TCTCGCTCGA CGATTTTGTG ATCACCTTCT TCACCACCGG CTCCGGCGTC
TCGTTGTTGC CGGTCGAAGT GTACGGACAG GTCAAACGCG CCATTACGCC GAAGATCAAC
GCCATTTCGA CCCTGATGCT GCTGGTGTCG ATCACCCTGG TGTTCCTCTC GCAATTCGTG
CAGCGTCGGC GGGAGATATG A
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| Protein sequence | MIDAQTTQSL RVVGGERRRS LGSLALGMHT VLTLAFLYAP IVVLVLFSFT RDSFGVRWTG
FTFDWYARLL ADQRLLTAAM NTLIVALVST VVSTIIGTMT ALAMERYRFR WRTGFDALLY
LPIVIPEIVM ALALLAFFAF SFGLLETLFG IRLQFGLATV TIAHIAFTIS FVVVVVRASL
KGFDMRLEEA AQDLGANEWQ TFRYITLPLI MPGVIGGALL AFTLSLDDFV ITFFTTGSGV
SLLPVEVYGQ VKRAITPKIN AISTLMLLVS ITLVFLSQFV QRRREI
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