| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2826 |
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| Symbol | |
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| ID | 5540313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3662970 |
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| End bp | 3664634 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640894953 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_001432915 |
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| Protein GI | 156742786 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3409] Putative peptidoglycan-binding domain-containing protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATAC GTCTATCTCG CACATGCCAG AGAGCGCCAT CGTCGCTCTC GAAGAAGACT
TCTGATGGAC ATGCGGATCG GAGCGCTGTC AGCGGTCGCA GCGGGGCGGT GATCGATACG
ATGCGCGGCG GCGCGCCGCT CGACCGGGAG CCGCGCTTCG GGCACGATTT CAGCCAGGTG
CGCATTCATG CCGATGCGCG CGCCGCAACC GTCGCGCGGT CGCTCGATGC GCTGGCGTTC
ACCGTTGGAA ACGACATTGC GTTTGCGCCG GGGCAGTATC AGCCGGGCAG CGACGAGGGG
CGCGCCCTGT TGGCGCACGA ATTGACCCAC ACCATCCAGC AGACCGGCGG CGCGGTGCGG
GTGCAGCGGC AGACGCTGCC CGATCTTCAA GGTGTCGGTG CGAATCTGGG ACTTCCCGAA
ACCATGCAGT CACCACCCTC CAGCGGTTTG CAGAGCGGCG GCAGGCGTAT GATCAGTTAC
GGCAGCCAGG GACCGGATGT CGCTGATGCG CAGCAGTTGC TCAACCAGCA TGGCGCAGCG
CCGCCTTTGG CAGTAGACGG CATCTTTGGA CCGAAGACGC GCCAGGCGAC GATTGCGTTT
CAGAAGAGTC GCGGGCTGGC GCCCGACGGG ATTATTGGAC CGTTGACCTG GGGGGCGCTG
GAGTCGGGAG CGCCAGGACC GCAGCCGCCG GGACCGCAAC CACAACCTCC AGGACCGCAG
CCGCAGCCGG TCGAGCGCTG GACGAATGAA GACCGTTTAA TGGTTGCTGC GCATATCCAG
CCCGGCGTGC TGACAGCACA CCAGGCATCG CGGATCGAAC CAGCAGTCAT GGCGCTTTCC
GACGATGAGT ACACCGCCTT CCGCGCCTTG TTGCAGAGTG CGGGTTCCAG TATGGAACGC
GCCTTTCTGT GCAAGGCGCT GGCAGCCAGT CGCTCACTGA GCGACATCGC CGACTTTGCC
GCCACGATCC GCGGACTGAG CGACAACTGG TTGTTGCGCA ACCTGAATGT GGTAGACCTG
AACGAAGCGG ACGGCGTCGA GCGCGGCATT ATTCAGCAAT ATGGCAACAG TTGCGGTCCC
ACGTCGGTGC AAGTCATCCG CGCCTCAGCC GACCCGATCT ATGCTCTGGC GTTGCGCTCC
GCCGGGCCGA TCGAACAGGC GTCGGAACAT GCCGTCAGCG CGCCGGACAC GATTCCCAAT
CAGATGCTTG CCGGTGAGCA AAAGGCGATC CTCGACACCC ATGCCGCTGC GGGAACCGGT
AATCCGGCGA CCGATCGCAC CCAGCCGACA GGCGGCGCGT GGGTCGAGGC GGAAATGAAT
GCGCTCTCTG GCGCAACCGG CGTAACCTAT CAGACGCAGA TCGTCGGCAC GCAGATGACG
CTTGACGCGG CGCTCGACGT GCTGAGAACC AACCTGGCGG CTGGTATCTT CGTGCCGATC
GTTGTTGGCG GCAGCGTCGG TGATACAGCG CACTATGTGA TGGCGATGGC CATCAGCGGC
AACCGTATCC AGATCCACGA CGTTGCCACC GGCGACACCG TCTGGCGCAC CGAGCAGGAT
TTCAAAGCCA GCACGCTGAA CCTGCCGAGC GGGCATACGA TGCTGACCGC TATCGATGTG
CCATCGGCTG TGCCAACAGC GCAGCCGCAA CCCGCAACGC CGTAG
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| Protein sequence | MSIRLSRTCQ RAPSSLSKKT SDGHADRSAV SGRSGAVIDT MRGGAPLDRE PRFGHDFSQV
RIHADARAAT VARSLDALAF TVGNDIAFAP GQYQPGSDEG RALLAHELTH TIQQTGGAVR
VQRQTLPDLQ GVGANLGLPE TMQSPPSSGL QSGGRRMISY GSQGPDVADA QQLLNQHGAA
PPLAVDGIFG PKTRQATIAF QKSRGLAPDG IIGPLTWGAL ESGAPGPQPP GPQPQPPGPQ
PQPVERWTNE DRLMVAAHIQ PGVLTAHQAS RIEPAVMALS DDEYTAFRAL LQSAGSSMER
AFLCKALAAS RSLSDIADFA ATIRGLSDNW LLRNLNVVDL NEADGVERGI IQQYGNSCGP
TSVQVIRASA DPIYALALRS AGPIEQASEH AVSAPDTIPN QMLAGEQKAI LDTHAAAGTG
NPATDRTQPT GGAWVEAEMN ALSGATGVTY QTQIVGTQMT LDAALDVLRT NLAAGIFVPI
VVGGSVGDTA HYVMAMAISG NRIQIHDVAT GDTVWRTEQD FKASTLNLPS GHTMLTAIDV
PSAVPTAQPQ PATP
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