Gene Rcas_2809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2809 
Symbol 
ID5540296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3639079 
End bp3640935 
Gene Length1857 bp 
Protein Length618 aa 
Translation table11 
GC content62% 
IMG OID640894936 
Productserine/threonine kinase protein 
Protein accessionYP_001432898 
Protein GI156742769 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGAACG ATCTTCTGGG ACAGATCATC GGGAACTGCC GTATCGAGGC GCTACTGGGC 
GCGGGTGGCA TGGGGCAGGT GTTTCGGGCG CGCCACGTTC ACCTTGATCG CTTGCAGGCG
ATCAAGGTCA TGCATCCGCA CATGGCGAGC GATCCCGGCT TTCAGGCGCG CTTTCGTCAG
GAGGCGCAGG CGGTTGCTGC GCTTGAACAT CCGCATATTG TGCGTATCTT CAATTTCGAT
GAACAGCAAG GTCGGTACTA TATTGCGATG GAGTATATGC CCGACGGATC GCTGCGCACG
TTGCTCGACC GTCGCATGCG TGAAGGTGTG AAATGGCCGC TCACCTTTGG TCTCGATCTG
ATCCGGCAGG CGGCGGAAGC GCTCGATTTT GCGCACGCCA GGGGGATTGT GCATCGCGAT
ATCAAGCCGG ATAATATGCT GATCGAACGG CACGCCGGTC CTGGCGGACG CTCGCTCTAT
GTGCTCAAAC TGACTGATTT CGGTCTGGCG CGGATGGTCG AAGGCGGCGG CGGCATTACC
GCCAGCGGGA TGACGGTCGG TACGCCGGCG TACATGTCGC CGGAACAGTG TCAGGGGCTG
CCGGTTGATG GGCGCAGTGA CATCTATTCG CTCGGGATAG TGCTGTATGA AGTGGTTACC
GGCTATTTGC CGTTCACTGT CAGCCGAATC AGTGAGGCGG TTGAGAAGCA CGTCTACGCG
CAGCCGCCGT CGCCGCGCAC GGTCGCGTCT GATCTGCCGG TTGCGGTTGA GGCGATCATT
CTTCGCTGCC TGGCGAAGAA ACCGGAGGAG CGCTTCGCAA CCGGCGCGGA ACTGGCTCAG
GCGCTCCGTC GGGTGATGCA GGCGCCAGCG CCTCTACCGC CTGTGCCCGA GGGGTTGGTC
GTCTGGGTGA TCGATGCGGC GGGACAGGTG GTGCAGCAGG TTCCACTCAC GGAACAGGGG
TTGACCGTCG GGCGGCGCGC GGGGCATCAG ATTGTGCTCG ATGATCCGGC AGTGTCACGT
AATCACCTGA CCATCGAATG GAGTGGGCGG CGTGTGCGCG TGAAGGACCT GGGATCGCGC
GGCGGGACGC TGCTCGATGG CGCACCGATG ACGCCGCATG AATCGCATGC CTGGGAAATC
GGGCAGCGTC TGGAGGTCGG TCCGTTTACG CTGGAACTGG CTCAACATCG GGATGATCAG
ATTGGTATGA CCCTGGCGCC CGGTCAGGAT TCGCTTCAGG TCGTCGCCGG TCAGGAGGTT
GTCATCGAGG TGACGCTGCT CAACCGTGGC AATAGCGACG ACACGCTGGC GCTGGCGGTC
GAAGGATGGC CCGCTTCCTG GATACGCATG CCGGAGGGTC CGGTTCGGGT GGCCGCCGGA
TCGCAAACGG TGGTTCGACT GGCGCTGTAT GTGCCTGTGT CTCCCGACGC GCGCGGCGGA
ACCTACGATG TGCAGGTTCA TGCGTGCTCG ACCATTCAAC CACAGACAGG CGCATCGGTG
CAGGCGTCGT GGAGTGTCGC CGCGCCGCCG TCGCTGAGTG TGCAGATCAT GCCTGAGATG
GCTCGCGGAC GTGATCAGGC GCGGTATGCG GTTCAGTTGA CGAATCAGGG TGGTGCGATA
GCGCATATCG TGTTGATGGC GGAAGATGAC CATCAGGCGC TGGCGTACAA TTTCGCGCAG
CACGAACTTC ATCTCCCTCC CGGGGAAACG GTCGAGACGT CGCTCGAGGT GCGCAGCAAT
CGGCGTATTT TTGGCGGCGC CCAAACGCAT CGGTTTAAGG TGATTGCAGC AGTGTTGGGA
GTTGGCACGG CAACAGCAGA GGCTACATTC GTGCAAACAT CGCTCTTGCC GATTTAG
 
Protein sequence
MMNDLLGQII GNCRIEALLG AGGMGQVFRA RHVHLDRLQA IKVMHPHMAS DPGFQARFRQ 
EAQAVAALEH PHIVRIFNFD EQQGRYYIAM EYMPDGSLRT LLDRRMREGV KWPLTFGLDL
IRQAAEALDF AHARGIVHRD IKPDNMLIER HAGPGGRSLY VLKLTDFGLA RMVEGGGGIT
ASGMTVGTPA YMSPEQCQGL PVDGRSDIYS LGIVLYEVVT GYLPFTVSRI SEAVEKHVYA
QPPSPRTVAS DLPVAVEAII LRCLAKKPEE RFATGAELAQ ALRRVMQAPA PLPPVPEGLV
VWVIDAAGQV VQQVPLTEQG LTVGRRAGHQ IVLDDPAVSR NHLTIEWSGR RVRVKDLGSR
GGTLLDGAPM TPHESHAWEI GQRLEVGPFT LELAQHRDDQ IGMTLAPGQD SLQVVAGQEV
VIEVTLLNRG NSDDTLALAV EGWPASWIRM PEGPVRVAAG SQTVVRLALY VPVSPDARGG
TYDVQVHACS TIQPQTGASV QASWSVAAPP SLSVQIMPEM ARGRDQARYA VQLTNQGGAI
AHIVLMAEDD HQALAYNFAQ HELHLPPGET VETSLEVRSN RRIFGGAQTH RFKVIAAVLG
VGTATAEATF VQTSLLPI