Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2807 |
Symbol | |
ID | 5540294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3632063 |
End bp | 3636337 |
Gene Length | 4275 bp |
Protein Length | 1424 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640894934 |
Product | FHA domain-containing protein |
Protein accession | YP_001432896 |
Protein GI | 156742767 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1716] FOG: FHA domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCGACA TCAACCCATC CAACACCCCC GACTCTCAAT CTGCGCCTCC GTCTGGGGAC AGATCGCCGC AGGTTGCCGT GATCGATGCG CAGAGCGGTT CGGTTCGCGC GATTGCGCTG ACGTCCGCTG GAATAACGGT CGGGCGTCTG GCAAATAACG CGCTTCAACT CGATGCTCCG GTTGTTTCGC GCAACCACGC GCGGATCGAC TGGGACGGCA GCCGCGCCAC CATTACCGAT CTGGGATCGA AAAGCGGCAC GCGCTTGGGT CGTGTGCGCC TCACGCCGCA GACGCCACAG GTTTGGGAGC CGGGACAGGA GGTGCACATC GGTCCATATA CGCTGCGCCT CGATATTGGG GCGCCATTGT CGTCGGAACC ATCGCCAGGC GCTCCTGCCG ATGTCCATGC TGCGCCGACT CAACGGATCG CGGGAGGCGC TCCGTCGGGA TTGGCGCTTG CGCTGTCGCC AGTGCAGATG GCGTTGACGC TGATCCCCGG TGAACCGACG GATGTTGAGG TGCGCGTCAC TAACCGGACT CCCGCTCCAC TAACTGTTGC GCTTGTGCTC GAGGGTCTGC CCGAACTGTG GGTGGAACCG GTCCCAACGC TGCGTGTGCC GCCGTTTTCG ATGAAGACGA CGAGTGTGCG TGTGCAGGCG CCTGCCACCG TGGAGAGCAT GGTCCGTCCC TACGATGTGC GCCTGCGCGC CGTGCCGCAG GAAGATCCGT CTGCCGCTGC CGATTTGGCG CTGGAATGGC GTGTGGCGCC ATTTCTGGCG GGTGAGATGC AGGTCTCGCC GCATCGGGTG CGTGGACGTG ACCAGGCGGT GGTGACCGTT CATCTGCGCA ATAACGGTAA TGCTCAGGCG GCGTACCATC TGCGCGCAAC CGATGAGCGC CAGATGGCCA GCGTCGCGTT TGCCGAGGAT CGTGTTGTGC TCGCGCCAGG AGAGACGGCA GACATACCGC TGACGATAGC CGCTCCTCGC CGCACCTTCG GCGGCGACCT CACCCACGCG CTGACCATCG AGGTCGAGGA GCAGGACGAC ATTCATGGTT TACCCTCCCG TCTCCTGCAT GATGAGGTGC GTTTTGTGCA GACGGCGCTG CTGCCGGTCT GGTCGCCACT GGCGCTGTTC GTGGCGCTCT TCCTGCTCTA TGGGCTGAAT GTGCCGGCGG TGGTGTGGTC TGCCGTTCCT GGCAGCGGCT TTCTTGCCGG GACACAGGGC CGGAATATCA CTGAGGAGTC GGCGCGCCTT GCTGCGCGCG CGACCCAGCA GGCAGTTCAG GGACAGACGG CGCTTGCTGA AGCAGGCGCG GCGCTGGCGG CAACCCAATC TGCGGTAGCG GCGTTGCCGA CCGAACAACA GGCAAGCGCA CAAACGGCGC TTGCCGCAGC GTTTCAGGCG ACAGTCACCT CACTGGCAGC AGCCCAGACG GCAGAAGCGC AGGCGCTGGC AGCGACCGGC GCGGCGCTCG AAGCGCAACT GGCGCAAACT ACGACCGCGC AGGGTCCGAC TGCTGCGGCG CAGGCGCCTA CCGGCAACGC GCCATCTCCT ACCACGCGCC CGGCGGTTAC CCCATCTCCG GTTGCAACGG CGCTGCGTCC GACTGCCACG GTTGCGTCGT CGCCGACGGC GGCGCCGCAG CCAACGACTG TGGTCGCAGG CAGCGGTGAG GTCGATCCGG CATCGATTGC GTTTGGCAGC ATCAAAAAAG GAACAACCGG AGCGCCGCGC ACGCTGTTGC TGAAAAATAC CGGTAATGCG CCGCTGACAA TCGACGAAAT CGTGATCGGT GGCGTCCATG CAGCCGATTT TGCGCGCGTC AGTGGTGGCG CCGAGAACTG CGGCGCGTCG CTGGCGCCGG GCGCCTCGTG TGCGATTACC CTGACCTTCA CGCCAGCAGC GGCGGGGCAA CGCACGGGCC AGCTTCGGAT CGAAACCTCG TCCGCTGGCG GGGTCTTGCT GGTGAGCCTG AGTGGATCAG GGACCGAAAT CCCTGAAGTG GCCTCGATTG TGCGCGTCGG CGGTAGTCCA ACCAACGCTG CCAGTGTGCA GTTCCAGGTC AATTTCAGCG AAGCAGTCAA AGGCGTCTCG GCAGCGAACT TCAGCCTGGT CACCCTTGGC GGCGCGGTTG GCGCCAGTAT TGCGTCGGTC TCTCCCGCAA GCGGTACGTC AACCAACCAA TGGACGGTGA CGGTGAATGC GGGTGGCGGC AACAAGACCA TCCGGCTCGA TTTTGTTAAT AGCAATGGTG TGACCAACGT CGATGGTAAT GCAGTAGAGA AATTGCCGTT CAACGCTGGC GACCAGATTG TGATCGATAC GACGCCGCCG ACTGTTACGC TGGGCAATAC GCCGCCATTG TTGACAAATA ATCCGGCGAT ACCGTTTACG TTTACCGGTA GCGACGATGT AAGCCCCAGC GTGACTTTCG AGTGCCGTAT TGATAGCGCC AGTTTTGCGC CCTGCACCAG TCCATTGACC CCTGCGGGCC TGGCTGATGG CAGTCGCACC TTCAACGTGC GCTCGCGCGA CCTGGCGGGA AATATCAGTA CGCCAGCGGC GTATACGTGG ACAATCGACA CGAATCCCCC CAATACGTCT ATCTCTGACG GTCCTTCGGT TGGAAGCACC ACGGGACCAG CCGTTGCCTT TACGTTCACG TCCGAACCCG GCGCAACATT CGAGTGCCGG TTGAATACCG CTGCATTTTC GCCATGCACC AGCCCTCAAA ATCTGACCGG ACTGACGACC GGTGTGTATA CCTTCAGCGT GCGCGCCATC GATGCAGCCG GGAACATCGA TGCCAGCCCG GCGAGTCGCA CCTGGACGGT CGATGCAACC CCGCCGGATA CGTCGATTAC CGGAGGACCG GCAGCCGGTA GCACGACTGG TCCGAATGTG AGTTTTACCT TCTCGTCGGA AGCAGGCGCA ACATTCGAGT GCCGGTTGAA TACCGCTGCA TTTTCGCCAT GCACCAGCCC TCAAAATCTG ACCGGACTGA CGACCGGTGT GTATACCTTC AGCGTGCGCG CCATCGACGC GGTCGGGAAC ATCGATCCAA CGCCTGCCAG TCGCACCTGG ACGGTTGATG CAACCCCGCC GGATACGTCG ATTCTCAGCG GACCGACCGG CACTATCAGT GCAACCAGCG TTACCTTTAC GTTCACTTCG ACCGAGTCGG TTTCGACGTT CCAGTGCCGT TTGAATACTG GATCGTTTGC AAGTTGCACC AGCCCGCACA CAATTACCGG TTTGACGCAC GGTTCACAGA CGTTCGAGGT GCGCGCCGTT GACTCGGTCG GCAATGTCGA TCCGACGCCT GCCAGTCGCA CCTGGACGGT CGATACACAA CCTCCGGAAA CAACAATCAC CACTGGTCCC GCCGACAGTA GCACAACCGG TCCGTCGGTG ACATTCAACT TTACTTCTTC CGAATCTGGC AGCACCTTCG AGTGCAGTGT GGATGGCGGT GCATTCCTGG CATGTTCTTC GCCGCAGAAC CTGTCGCTGG CGAATGGCAC GCATACATTT GCAGTGCGCG CCATTGACTC GGTCGGCAAC ATCGATCCGA CGCCTGCCAG TCGCACCTGG ACGGTCGATG CCATACCGCC AGCCGTGACA AGTGTGACCT CCTCGACGTC GGATGGGACG TATGGGGTCG GCGCCAGCAT TAATATCACG GTCAACTTTG GCGAGTCGGT CGCGCTGAGC GGCGGTTCGC TCCAGGTGAC GCTTAACACC GGTGTGACGA TCTCCATTGC GCCCTTCAGT GGCGTCAGCG CCAGTGGAAC CTATGTGGTC GGTGCGGGGC AGAACACTGG CGATCTCAAC TCCACGGGGC TGACGCTGAC GGCTGGGGCA ACGCTGCGTG ATGCGGCGGG GAATAATGCC GTGCTGACCA TTCCTACGGG CCAGTCGCTA GCGGATCTGC GCGATATTGT GATTGATACA ACCCCGCCTC CCGCTCCGAC CGTCACCATT CCGAGCACGC CAACAACGGT TCTATCTACG ACGACAACCT TCAATATTCA GGGAACTGCT GAAGCCAACA GTCTCGTGCA GGTATGGAAC GATGCCAATA ACAATGGTGC GATCGACACG GGTGAGAGTG TCGCGGCCTC GCAACAGTTG ACCGGCGGCG GGACAAGTTT TTCGATCAGC GTGACCCTTG CGACCGGCGA CAACAATTTT GTCGTGACCG CCACCGATGC TGCCAATAAT CGTTCGACGC CAACCGATGT GCCGACGATC ACCAGAGATA CATGA
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Protein sequence | MPDINPSNTP DSQSAPPSGD RSPQVAVIDA QSGSVRAIAL TSAGITVGRL ANNALQLDAP VVSRNHARID WDGSRATITD LGSKSGTRLG RVRLTPQTPQ VWEPGQEVHI GPYTLRLDIG APLSSEPSPG APADVHAAPT QRIAGGAPSG LALALSPVQM ALTLIPGEPT DVEVRVTNRT PAPLTVALVL EGLPELWVEP VPTLRVPPFS MKTTSVRVQA PATVESMVRP YDVRLRAVPQ EDPSAAADLA LEWRVAPFLA GEMQVSPHRV RGRDQAVVTV HLRNNGNAQA AYHLRATDER QMASVAFAED RVVLAPGETA DIPLTIAAPR RTFGGDLTHA LTIEVEEQDD IHGLPSRLLH DEVRFVQTAL LPVWSPLALF VALFLLYGLN VPAVVWSAVP GSGFLAGTQG RNITEESARL AARATQQAVQ GQTALAEAGA ALAATQSAVA ALPTEQQASA QTALAAAFQA TVTSLAAAQT AEAQALAATG AALEAQLAQT TTAQGPTAAA QAPTGNAPSP TTRPAVTPSP VATALRPTAT VASSPTAAPQ PTTVVAGSGE VDPASIAFGS IKKGTTGAPR TLLLKNTGNA PLTIDEIVIG GVHAADFARV SGGAENCGAS LAPGASCAIT LTFTPAAAGQ RTGQLRIETS SAGGVLLVSL SGSGTEIPEV ASIVRVGGSP TNAASVQFQV NFSEAVKGVS AANFSLVTLG GAVGASIASV SPASGTSTNQ WTVTVNAGGG NKTIRLDFVN SNGVTNVDGN AVEKLPFNAG DQIVIDTTPP TVTLGNTPPL LTNNPAIPFT FTGSDDVSPS VTFECRIDSA SFAPCTSPLT PAGLADGSRT FNVRSRDLAG NISTPAAYTW TIDTNPPNTS ISDGPSVGST TGPAVAFTFT SEPGATFECR LNTAAFSPCT SPQNLTGLTT GVYTFSVRAI DAAGNIDASP ASRTWTVDAT PPDTSITGGP AAGSTTGPNV SFTFSSEAGA TFECRLNTAA FSPCTSPQNL TGLTTGVYTF SVRAIDAVGN IDPTPASRTW TVDATPPDTS ILSGPTGTIS ATSVTFTFTS TESVSTFQCR LNTGSFASCT SPHTITGLTH GSQTFEVRAV DSVGNVDPTP ASRTWTVDTQ PPETTITTGP ADSSTTGPSV TFNFTSSESG STFECSVDGG AFLACSSPQN LSLANGTHTF AVRAIDSVGN IDPTPASRTW TVDAIPPAVT SVTSSTSDGT YGVGASINIT VNFGESVALS GGSLQVTLNT GVTISIAPFS GVSASGTYVV GAGQNTGDLN STGLTLTAGA TLRDAAGNNA VLTIPTGQSL ADLRDIVIDT TPPPAPTVTI PSTPTTVLST TTTFNIQGTA EANSLVQVWN DANNNGAIDT GESVAASQQL TGGGTSFSIS VTLATGDNNF VVTATDAANN RSTPTDVPTI TRDT
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