Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2790 |
Symbol | |
ID | 5540277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3608227 |
End bp | 3608973 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640894917 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_001432879 |
Protein GI | 156742750 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACA TCTCGCTCGA GACCCTGACT TACGAACAGG TGGCGAAAAC CATTGACCAC TCGCTTTTGC GTCCAGAACT GACGACTCAG GAAGTCGCAG CCGGGTGCGA TCTGGCGCGA CGCTACCATA CCGCGTCGGT CTGCGTCAAA CCGTGCGATG TGCCGCTGGC GGCGCGCCTG TTGGCAGGCA GCGATGTGGC GGTTGGTACG GTGGTCGGCT TCCCGCATGG CAGCAGTGCA ACTGCCGCCA AAGTCTTCGA GGCGCGCCTG GCGATTGAAC AGGGCGCTGT CGAACTCGAC ATGGTGATCA ATATTGGCTG GCTGCGCTCC GGTCACGATA ACGAGGTGCG CGAAGACATT CGCGCGGTTG TCATTGCCAC CGAAGGTCGG GCGCTGGTGA AGGTCATTCT GGAGAACGCT TATCTGAGCG ATGCCGAGAA GGAGCGCGCC GCGCGCCTGG CGGAGGAAGC GGGGGCGGAT TTTGTCAAGA CCTCGACCGG TTTTGCGCCA TCTGGCGCCA CCATTCCCGA CCTGATCCTG ATGAGGCGCA GCGTTTCACC ACGGGTGCAG GTGAAGGCAG CGGGCGGTGT GCGCACCCTT GATGCGCTGA TCGACGTGTT GCGCGTTGGG GTTACGCGGG TCGGCGCCAC GGCGACCGCC GCCATCCTCG ATGAGTTTTG CCGACGCAAG GGGTTGCCGG TGATCGGCGA AGGTGCAGCA GCGCCGATGA TGCCGGGGGC GTACTGA
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Protein sequence | MSDISLETLT YEQVAKTIDH SLLRPELTTQ EVAAGCDLAR RYHTASVCVK PCDVPLAARL LAGSDVAVGT VVGFPHGSSA TAAKVFEARL AIEQGAVELD MVINIGWLRS GHDNEVREDI RAVVIATEGR ALVKVILENA YLSDAEKERA ARLAEEAGAD FVKTSTGFAP SGATIPDLIL MRRSVSPRVQ VKAAGGVRTL DALIDVLRVG VTRVGATATA AILDEFCRRK GLPVIGEGAA APMMPGAY
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