| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2758 |
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| Symbol | |
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| ID | 5540244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3570202 |
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| End bp | 3571224 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894884 |
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| Product | methionine synthase vitamin-B12 independent |
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| Protein accession | YP_001432847 |
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| Protein GI | 156742718 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000302857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTCC CGCTTCTCCC GACTAGCGTC ATCGGTTCTT ACGCCTGGCC CGCCTGGTTG
CACGTTGCGC TCTGGGCAGC GCAGCGCGGC GAACTTGGAC CGGAAGACAT GCGCGAAACG
CAGGACGATG CCGTCGATAT GGCGCTGCGC GACCAGGAGG ATGCCGGTGT GGACATTGTG
AGCGATGGGG AGATGCGACG CGCCGGTTTT TTCACTGCGG CATTCTATGG TTTTCTCACG
GGGCTGCGTG AATTGCCGCC ACAGCGTCGG ATCGGCGTGG CGGGGCACGA TCAGCGCGAA
AGTTACGAAG CAGTCGAACC GATCACGGCG CCCAATGGTC TTGGGTTGCT GGTCGAATAT
GAGTATGTCA GGCAACGCAC GACACGCCCG ATCAAGATGC CGTGTCCTGG TCCGTTTACG
CTTGCCGGAC GGATCAAGCC TGGTGCAGCA TATCGAACAC GGTGGGATGT GGCAGAGGCG
CTCGTGCCGA TCATCAATGC CGAGCTGAAA GCGCTGGCAG CGGCGGGATG CACCTTCATC
CAGATCGATG AGCCATCGAT TGCTGTGCGC CCTGATGCGC CGCGCGCATT TGTCGAACTG
TTCAATGCGA CAGTTGCCGG CGTCGACGCT AGAATCGGGT TACACCTTTG TTTTGGCAAC
TATGTCGGGC GTCCCACAGC CAGGCGCACC TATCGTCCGC TGTTTCCGCA CATTCTCGAA
GCGCATGCCG ATCAGTACGC GCTGGAGTTC GCCAACCGCG AACTGGCGGA AATCGATCTG
TGGCGCGAAT TTCCGAGCGA GAAAGAACTT GCCGCCGGGC TGGTCGATGT GAAGAACTAC
TACATTGAGA CACCGGAGGA TGTCGCCGAG CGGATCCGGG TGGCGTTGCG GTATGTGGCG
CCGGAGAAGT TGACAATCGT GCCCGACTGC GGATTCAGCC AGACGGCGCG TTGGGCGGCG
CACGCCAAAC TGAAGGCGAT GGTCGAAGGG GCGCGCATGG TTCGCCGGGA ACTGGCAGGC
TGA
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| Protein sequence | MDLPLLPTSV IGSYAWPAWL HVALWAAQRG ELGPEDMRET QDDAVDMALR DQEDAGVDIV
SDGEMRRAGF FTAAFYGFLT GLRELPPQRR IGVAGHDQRE SYEAVEPITA PNGLGLLVEY
EYVRQRTTRP IKMPCPGPFT LAGRIKPGAA YRTRWDVAEA LVPIINAELK ALAAAGCTFI
QIDEPSIAVR PDAPRAFVEL FNATVAGVDA RIGLHLCFGN YVGRPTARRT YRPLFPHILE
AHADQYALEF ANRELAEIDL WREFPSEKEL AAGLVDVKNY YIETPEDVAE RIRVALRYVA
PEKLTIVPDC GFSQTARWAA HAKLKAMVEG ARMVRRELAG
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