| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2725 |
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| Symbol | |
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| ID | 5540211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3520769 |
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| End bp | 3523117 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894851 |
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| Product | hypothetical protein |
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| Protein accession | YP_001432814 |
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| Protein GI | 156742685 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGGTA TAATCCCGAC ATCTATGAAA CCGTCGTCTG CACATCGTCC TGACCGGCGC
CTTGTTGCGC ATCTGCCGCT CCTGCCGATC CTGGCAACAG CAGCGATCTT CCGTATTGCG
CTGTGGGGAG CGTTACCCCG CCAGGGGCTG ATATCCGATG AAGGCGAATA CCTGTCGGCT
GCCTGGTGGC TGGCGCACGG ACGCGGTTTC GACTGGCACC AGGGATACCT GTGGACGCGC
GCGCCGCTCT ATCCGATCTT TCTGGCAGCG CATCTTCGTC TGTTCGGCGA TCAAGCCACT
GCGATATTCG CAACACAAAC CGTGCTCAGT TTGATCAGTG TTGTGCTGAT CGCTGCGCTT
GCCCGACGGA TTGCGCCGCC TGAATTGAAA TCTGCGCCGT TGATTGCGGC TGTGCTTGCC
AGCATCTATC TTCCCTTCGT CATCTACCCG CAGATGTTCC TCTCCGAAAC CCTCTATATC
TGCCTTGTGC TCGGAGGTAT GCTGGCGCTG CTTCACAGCC AAGCGCAACC AGCGCATGCG
CTGCCCGACA GGTCGGCACA CTCGCTCGTC GGGTCGATTG CTGCCGGTAT CCTGTTCGGA
CTGGCGACAC TCACGCGCAG CCAGACACTT CTGGCGCTGC CAGTGATTGC CGGCTGGGCA
GTGATGACCA GGAGACGCGA TCTGCGGCGC GCACTGTTAT TCCTGGCGAC TGCCACAATC
GTCATTGCGC CCTGGACGGC ATACAACTCA CGGATCTATG GCGGGTTCAT TCCGGTGGAC
ACCAGCGGCG CCTTCAACCT GCTTATCGGC GCGTGGTCGG CGCACGATGG AGAACGACGC
GACGCGCCAA CCCGCGATTT CGTGTTGGCG ATGTTTCCTG ATCGGCGCAC AGCGCCGCCT
GCCGAAACCT GCCTGCCTCA CCCCGGACCG CAACCGAATC AGGCAGCGCG CCAGTCCGCT
ATGGTCCGCG AGGGTCTCTG CCTGATTGCG GATCGACCGC AGGCATTTGT GCAAAAATCA
CTGATCGAGC TCGTTGATCT CTTCCGCATC AATTACACCG GCGCTGAACG TTTGACCGAT
GGCTTCTCAA CCGGTCGTTT GCCGGTCTGG TATGTTCTGA TGACCTTTTT GCTCGACGAT
ACGCTGTACG TGCTTGCCCT GCCGCTGGGA ATCATTGGAT GGGCGCTGGC GCGGCGTTCT
GTGTCCGTTT CCAGTGCACC GGTATTGCTG ATGGGGGTCT GGCTGATCTT CAACGTCCTG
CTGGCGCCGT TGCTGTTTGC CATCAACCGT TTTCGCATGC CACTGCTGCC ATTCATGTTC
ATTCTTGCGG CGGTGACGAT CAATACGCTC ATTCGCCATC GTGATCGGTT CTTCGCTCCA
TTACGCACAC GCTACGGCAT TGCCTGTGCA ACGCTTGCTG CGGCGCTGAC CCTGATCGCC
GCCTCGCCGC ATGCCTGCCT GGAGCCGCGC CCGCCGGGCA GTGATTCACA GTGGGCGTCG
TACCTGGGAC CGTACCCGTC GAGTCTGGCG ATCACCCGCA TCGCACTTGC GGCGCGCCCG
TTCGCGCTGG AGGATGCGCG CTTTCTGGCG GCGTTACAAT CCGGCGATCT TGTGACAGCC
GAAGCCATTT TGCAGCGCGG GACGCCAGGG CGCGACACGG CACGGTTGGG CGCCGCGCTG
ATTGCCGCTC ATCAGGGTCG GTACCGCGAG GCGCTGGCAC GGCTGCCGCC TCCCAATGCA
CTCATCGATG CACAGGATGT GAAAGGCAGC GTGGTGCGCG GCGATCTGCT GCGGAGCATC
GGCGACGAGG CAGGCGCGCG CGCGGCGTTC ACGCCACGGC ATGTCGATGC CGCCAACCCG
GTCGAGTGGG CTTGGGATTG GTTGCATCCG GCGCCAACCC ACGTCATCGA TCTGGGAGGG
AATCTTGATC TGGGGTATAT TCGGGGTTGC TACCTCGGCG AAGGCGACGC CGCTGAACGG
AGAACGTATC GCTGGTGTAC TGATGGCGCG CTATTGCGCT TTCCCGGCGC CGGACGCGCA
TATTCGCAGC GCCTGACATT CATTGTCGAT GGGCGCGGAT GGCCCGCCGA TCTGCGTCCC
GACTCACCGG TGCGTGTCCT GATCGGCGGG AATCAGGTCG GCACATTTCC GGCAAACCCG
GACGGGGTGC GCGCCTTCGA GGTAACTCTG CCGCCGATGA CGGAAGGCGC GGATGTTGTC
GTCGAACTGC ACGGACCGGT TTTCGTTCCT GATGCGGCGC GCTATCTGAG CCAGCAGGGC
GAAGCAGCCG TCGGACAGGT ACACCGGTTG ATGGTGCGGC TGGATCGGGT CGAGATTGGG
AAGAACTGA
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| Protein sequence | MSGIIPTSMK PSSAHRPDRR LVAHLPLLPI LATAAIFRIA LWGALPRQGL ISDEGEYLSA
AWWLAHGRGF DWHQGYLWTR APLYPIFLAA HLRLFGDQAT AIFATQTVLS LISVVLIAAL
ARRIAPPELK SAPLIAAVLA SIYLPFVIYP QMFLSETLYI CLVLGGMLAL LHSQAQPAHA
LPDRSAHSLV GSIAAGILFG LATLTRSQTL LALPVIAGWA VMTRRRDLRR ALLFLATATI
VIAPWTAYNS RIYGGFIPVD TSGAFNLLIG AWSAHDGERR DAPTRDFVLA MFPDRRTAPP
AETCLPHPGP QPNQAARQSA MVREGLCLIA DRPQAFVQKS LIELVDLFRI NYTGAERLTD
GFSTGRLPVW YVLMTFLLDD TLYVLALPLG IIGWALARRS VSVSSAPVLL MGVWLIFNVL
LAPLLFAINR FRMPLLPFMF ILAAVTINTL IRHRDRFFAP LRTRYGIACA TLAAALTLIA
ASPHACLEPR PPGSDSQWAS YLGPYPSSLA ITRIALAARP FALEDARFLA ALQSGDLVTA
EAILQRGTPG RDTARLGAAL IAAHQGRYRE ALARLPPPNA LIDAQDVKGS VVRGDLLRSI
GDEAGARAAF TPRHVDAANP VEWAWDWLHP APTHVIDLGG NLDLGYIRGC YLGEGDAAER
RTYRWCTDGA LLRFPGAGRA YSQRLTFIVD GRGWPADLRP DSPVRVLIGG NQVGTFPANP
DGVRAFEVTL PPMTEGADVV VELHGPVFVP DAARYLSQQG EAAVGQVHRL MVRLDRVEIG
KN
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