Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2720 |
Symbol | |
ID | 5540206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3509905 |
End bp | 3511311 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640894846 |
Product | phosphomannomutase |
Protein accession | YP_001432809 |
Protein GI | 156742680 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1109] Phosphomannomutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGATGA CTATTCACCC GTCCATTTTT CGCGCATACG ACATCCGTGG CGTTGTTGAT CGCGATCTTT CCGAAGAGGT GTATCGGACG TTGGGACGCG CCGGCGGCAC GTTTTTCCGG CAGCACAAGC GGCGCCGTAT TGTGGTAGCG CGTGATGCGC GCCTGACATC GCCAGGGTAT GCTGCGGCGC TGATCGATGG GCTGCGCCGG AGCGGATGCG ATGTCGTTGA TATTGGCATG GCGCCGACGC CGCTGATGTA TTTTGCCGTT TCCTTCCTGC GCGCCGACGG CGGCGCCGTT GTGACGGCGA GCCATAATCC GCCACATTTC AATGGCTTAA AACTGCGGCT CTCCGATCCG TTGTATGGCG GTACGCCGTT CAGCAGCGAT CAGATTCAAG AGGTGGGACG GATTGCCATG AGCGGTTCGT TCGCTTCCGG GAATGGCGCA TATGAGCAGG TGGATGTGAC AGAAGAGTAT GTGCGCGATG TGACCCGCCA TATTTCGCTC AAACGTAAGC CCAAGGTTGT GCTCGACGGC GGGAACGGGG TCGCCGGTCC GCTCGGTATG CGCACGCTGG AAGCGATTGG CTGCGAGGTC GTTCCCCTGT TTATCGAGCC TGATGGGACA TTTCCCCACC ATCATCCGGA TCCGCTCAAA GAGGAGAATG TTCAGGACCT GATTCGCGTC GTGCGCGAGA CCGGCGCCGA GATGGGCATT GGGCTCGACG GTGATGGCGA CCGCCTTGGT GTTGTCGATG GGAATGGTGA GATCGTCTTT GCCGACCGCT ACCTGATCGT TCTGGCAAAA CAGGCGCTGG CACGCAGACC GGCGCCAATC GTGTTTGATG TGAAGTGCAG TGTTGTGCTG ATCGATGCCA TCCGCGCCTT TGGGGGCACA CCGGTGATGT GGAAGACCGG CTATTCAAAT CTGTCGGCGA AGATGCGCGA GGTGGGCGCG CCGCTGGCGG GTGAGTTGAG CGGTCACGTC TTTGGCGCAG TCGAGCATCA TTTCCACGAC GATGGCATCT TTGCCGGGTG TATGCTGCTC GATGCGCTGG AACAGAGTGG GCAGACGCTT GTCGAGGCGC TGGCGCCGTT TCCGCCGTTG CCGGCGCTCT CGGAAGGTCG CCTGCCATAT AACGAAGAGG CAAAGTTTCA GGCGATTGAC TTCGTGCGCG ACTACTTTGC GGCACGCTAC CCGGTCGTTG ATGTTGACGG CGTGCGCGTC GACTTTGGCG ATGGTTGGGG GATTCTGCGC GCGTCGAATA CTGAACCGGC AATCACGACT CGTTTTGAGG CACGCACCCT GGAGCGCGCT TATGAGATCC GCGACATAAT GATCGGCAAG TTGCGCGAGT TTGTGCCAGC CCACAGCACC GGTGGCGCTG GGTCTGGCGG CAGGTAA
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Protein sequence | MMMTIHPSIF RAYDIRGVVD RDLSEEVYRT LGRAGGTFFR QHKRRRIVVA RDARLTSPGY AAALIDGLRR SGCDVVDIGM APTPLMYFAV SFLRADGGAV VTASHNPPHF NGLKLRLSDP LYGGTPFSSD QIQEVGRIAM SGSFASGNGA YEQVDVTEEY VRDVTRHISL KRKPKVVLDG GNGVAGPLGM RTLEAIGCEV VPLFIEPDGT FPHHHPDPLK EENVQDLIRV VRETGAEMGI GLDGDGDRLG VVDGNGEIVF ADRYLIVLAK QALARRPAPI VFDVKCSVVL IDAIRAFGGT PVMWKTGYSN LSAKMREVGA PLAGELSGHV FGAVEHHFHD DGIFAGCMLL DALEQSGQTL VEALAPFPPL PALSEGRLPY NEEAKFQAID FVRDYFAARY PVVDVDGVRV DFGDGWGILR ASNTEPAITT RFEARTLERA YEIRDIMIGK LREFVPAHST GGAGSGGR
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