| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2688 |
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| Symbol | |
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| ID | 5540170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3471207 |
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| End bp | 3472370 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894810 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_001432777 |
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| Protein GI | 156742648 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.504834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGATTG CCATTTTTAC CGAGACCTTC CTGCCCAAAA TCGATGGTGT GGTCTCGGTG
CTCTGTCTCG CGCTGCAACA CCTGTACGAC AAAGGGCACC AGGTGTTGCT CTTCGGTCCT
CCCGATATGC CCGAAACGTA TGCCGGGCAT CGCCTGGTGC GCACCGGCGG ACCCCGGTTC
TGGCTCTATC CCGAACTTCG GATCAATTTG CCAAGCGGCA AAATTGTGCG CGAGCTGCGC
GCATTTCAGC CTCATCTCGT CCATGTTGTC AATCCCGCCT TCCTTGGTCC TACCGGCATC
ACACTCGCAA AGATGTTCAA TCTGCCGCTG GTCGCGTCGG CGCATATGGA CATCACGAGT
TATACGACGC ACTATGTCGG CGCCTGGGGA GTTCCCATCG CCTGGTGGCT CTTTCGAACC
GGTCACAATT TTGCCGATCT GAACCTGGTG CCGTCAAGCG CCATGCTCCA GCAGGTGCGC
GAACGCGGGT ATCGGCGGGT GCGCTGGTGG CATCGCGGCG TCGATACGGA ACGGTTTCGT
CCCGATCTGC GCAGCGATGC GATGCGTGCG CGACTGAGCG GTGGTCGTCC CGATGACTTC
CTGGCAGTCT ATGTCGGGCG GATCACGCGT GAGAAGAATG TTCACCTGCT GCGCGACGCC
ATCTGCGGAA TAGAGGGGGT CCGCCTGGCG CTGGTCGGCG GCGGACCTGA ACTGGAACAG
ATGCAGTCGC ACTTCGCCGG CACAGGAACC GTGTTTACCG GCTATCTGCG CGGCGACGAT
GTGGCGGCTG CGTATGCCTC GGCGGATGTG CTGGTGTTTC CATCAACCAG CGAAACATTT
GGCATGGCGC CGCTCGAGGC AATGGCGTGT GGTCTCCCGG TCGTTGGCTC AATGACTGGT
GGCCTGGTCG ATACCTTGCG CGATGGAGTC AACGCGCTGG TTTACGATCC GAATGATCCG
ATGCAAATGC GTGAGCGGGT GCAGTCGTTG CGCGACTCGC CCGACCTGCA CGCGCGGCTG
CGTCAGGGGG CGCTCGCTCA TGCGCGCAGT CGCCGCTGGC AGGCGACCAT GGATCAACTG
GTTGGGTATT ACGAACTGGG AATCCGCTAC CATCGCCAGG CGCAACTGCG GCGACGGTTG
CGGTTGATTC GTGCGCCGGT ATGA
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| Protein sequence | MRIAIFTETF LPKIDGVVSV LCLALQHLYD KGHQVLLFGP PDMPETYAGH RLVRTGGPRF
WLYPELRINL PSGKIVRELR AFQPHLVHVV NPAFLGPTGI TLAKMFNLPL VASAHMDITS
YTTHYVGAWG VPIAWWLFRT GHNFADLNLV PSSAMLQQVR ERGYRRVRWW HRGVDTERFR
PDLRSDAMRA RLSGGRPDDF LAVYVGRITR EKNVHLLRDA ICGIEGVRLA LVGGGPELEQ
MQSHFAGTGT VFTGYLRGDD VAAAYASADV LVFPSTSETF GMAPLEAMAC GLPVVGSMTG
GLVDTLRDGV NALVYDPNDP MQMRERVQSL RDSPDLHARL RQGALAHARS RRWQATMDQL
VGYYELGIRY HRQAQLRRRL RLIRAPV
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