Gene Rcas_2679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2679 
Symbol 
ID5540161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3462558 
End bp3463007 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content63% 
IMG OID640894801 
Producthypothetical protein 
Protein accessionYP_001432768 
Protein GI156742639 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.207946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACTT TGTTGCTGTT ACAGGTCGAT GGCACGCCTG GCACGATGCC GCGCGGCATT 
GCCGGGCTGG GGATCGTTGT CCGCAGCGCG ACCGGCGCGG TGCTGGCATG GTCGTGCGAA
CGCGCTCCGG CAATGTCTAA TAACGAGGCG GAGTATCAGG CGGTCATTGC AGGGTTGATG
TTCGTGATCC GGCACTATCC TGGTAGCAGG GTACGCTGCC TGACCGATAG CCGGATCGTG
GTTGACCAGC TGGCGGGTCG CCACGCGGTG CGCGCTGCGG TGCTGCAACC GTTGCATATG
CGCGCACAGG AACTCGTTCG TCAGCACGGT CGCGTTACAT TCCTCGCTAT CCCGCGCGAA
CTCAATCGCC TGGCGGACGC GCTCGCCTGG GAAGCGCTCG ACGGTCGCGA CTGGCTGGCG
TGTGCGGTCA ATCGTCATCA TGCGATGTGA
 
Protein sequence
MMTLLLLQVD GTPGTMPRGI AGLGIVVRSA TGAVLAWSCE RAPAMSNNEA EYQAVIAGLM 
FVIRHYPGSR VRCLTDSRIV VDQLAGRHAV RAAVLQPLHM RAQELVRQHG RVTFLAIPRE
LNRLADALAW EALDGRDWLA CAVNRHHAM