| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2676 |
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| Symbol | |
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| ID | 5540158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3458387 |
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| End bp | 3459385 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640894798 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_001432765 |
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| Protein GI | 156742636 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACCC TTTACATCCA GGAACAGGGC GTGATGGTGC GCAAACGCGA TAATCAGGTG
CTGGTCACCA GAGACGGTCA GACGCTCCAC GATGTTCCGC TGGCGAAGAT TGACCAGGTG
GTACTGATGG GGCGTGGTGT GCAGATCTCG ACAGCGCTGC TCATCGACCT GCTCGAACGC
GGCATTCCGG TCACGCTCAC CAATCAGCAC GGTAGTCGCC ACTACGCCAC GCTCACGGCA
GGACCGTCGC GGTTCGGCGA TCTGCGCACC GGGCAGATGC AGTACGTCAA CACTCCTTCA
CGCGCGCTGG AACTGGCGCG CGCGATTGTG ATCGTCAAGC TGACGAATCA GCGCCGCCTC
CTGGCGACGA CCGGCTGGCC CGCTGCGGCA TCCGCCATGC AGCAGATCGA CGCAGCGCTG
ACAGCGGCGT CTCAGGCGCA GAATGTGGAC ATATTGCGCG GGCATGAAGG CGCTGCCGCC
GCCGCCTACT TCGGCGCCTG GCGCGCATCG CTGCCGCCTG CCTGGGGATT CGGCGGGCGC
GCCTTCTACC CGCCGCCCGA CCCGATCAAT GCCATGCTGT CGTTCGGCTA CACCCTGGCG
CTCCATGATG TCATCACCGC CGTGCAGATC ACGGGTCTCG ACCCTTACCT GGGCACATTC
CACGTCATCG AAACCGGTCG CCCATCACTG GCGCTCGATC TGCTGGAAGA GTTCCGCCCG
GTGATCGTCG ACCGCATGGT GCTCGACATC GTGCGCACCA ATGCCATCGG ACGCGAGCGC
TTTCACCGTC CGCAGGAACG ACCCGAAGCG GTCTACCTCG ATGCTGAAGG GCGCGCCTTC
CTTGTGCAGC GGTACGAAAC GCTTCTCCAG ACGAAGGTGC GGTTGCCCGG CGGCGAGCAG
ACGCCGATGC GCCGGGTCAT CCTGCTGCAG GCGCAGGCGA TCGCGCGCGT GCTGCGCGGC
GAACAGGAGC GATATACCGG ATTCAGTCTC AATTCTTGA
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| Protein sequence | MPTLYIQEQG VMVRKRDNQV LVTRDGQTLH DVPLAKIDQV VLMGRGVQIS TALLIDLLER
GIPVTLTNQH GSRHYATLTA GPSRFGDLRT GQMQYVNTPS RALELARAIV IVKLTNQRRL
LATTGWPAAA SAMQQIDAAL TAASQAQNVD ILRGHEGAAA AAYFGAWRAS LPPAWGFGGR
AFYPPPDPIN AMLSFGYTLA LHDVITAVQI TGLDPYLGTF HVIETGRPSL ALDLLEEFRP
VIVDRMVLDI VRTNAIGRER FHRPQERPEA VYLDAEGRAF LVQRYETLLQ TKVRLPGGEQ
TPMRRVILLQ AQAIARVLRG EQERYTGFSL NS
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