| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2645 |
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| Symbol | |
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| ID | 5540127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3409884 |
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| End bp | 3411434 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894768 |
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| Product | 4-alpha-glucanotransferase |
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| Protein accession | YP_001432735 |
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| Protein GI | 156742606 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1640] 4-alpha-glucanotransferase |
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| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.219759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCC AACGAGCCAG CGGTATTCTG TTGCACCCGA CATCGCTCCC TTCGCGATGG
GGTATTGGTG ATCTGGGCGA TAGCGCGTAT GATTTCGCCG ATCTTCTTGC GGCTGCGGGC
CAGCGCATCT GGCAGGTTAT GCCACTTGGT CCGACCGGTT ATGGCGACTC GCCCTACCAG
AGTTTCTCCG CCTTTGCCGG CAACCCATTG CTGATCAACT TCGACATTTT GCTCGAAGAA
GCGCTGCTCG CGCCGTCGGA CCTCGCCGAT GCGCCGATCC TGCCCGATAC CGCCGTCGAT
TATGGCGCCG TCATTCCGTT CAAGCAGCGC ATGCTTCGGC GCGCCTTCGC GCGCTTTCAG
CAGGGGTTCG CCGATCATCT GCGCCCCGAT TTCGAGGCGT TCTGTGAGAC TCAGGCGTCC
TGGCTTAACG ACTACGCGCT GTTCGCTGCC TTAAAAAGCG CCAATGGCGG CGGTTCCTGG
TCATCGTGGG ATGCAGGTTT GCGCAGCCGC GATCCCGCTG CACTCGATGC AGCGCGTCGC
ACTTATGCCG ACGAGATCGC CTACCAGTGC TTCATTCAGT ATCTCTTCTT CGATCAGTGG
CTGGCGTTGA AGAAGTATGT CAATGACCTC GGTATTCAGA TGATGGGAGA CATTCCGATC
TTCGTCGCCT ACGACAGCGC CGATGTCTGG GCGCATCCTG AGTTATTTTT CCTGGACCAG
GAAGGCAGAC CAACAGTAGT GGCCGGCGTC CCGCCCGACT ACTTCAGCGC CACGGGGCAG
TTGTGGGGCA ACCCGCTCTA TCGCTGGGAT GTGCTGAGAG AACGCGGCTA TGACTGGTGG
ATCGAGCGGT TCCGCGCTAC GCTAACGCTG GTTGATATTG TGCGTGTCGA TCATTTTCGC
GGCTTTGCAG CGTACTGGGA AGTGCCAGCC GACGAAGAGA CGGCAGTCAA TGGGCGCTGG
ATCGAGGGTC CGGGCGCCGA TCTGTTCGAG GCGGTCGAAC GGGCGCTTGG CGCACTGCCA
ATTGTTGCAG AGGACCTGGG GGTGATTACG CCTGATGTCG AAGCACTGCG CGACCGGTTT
GGCTTTCCGG GGATGCGGGT GTTACAGTTC GCCTTTGGTG GAAAAGCCGA TCAGCCCTAT
CTGCCACACA ATCATATCCA GCGCTGCGTC GTGTATACTG GCACGCACGA CAACGATACA
ACTCTGGGAT GGTGGCGCAC CGCATCGGAG AAAGAACGGC GCCATGTGCA GTTGTACCTG
GGGCGCAGCG GCGATGATAT TGCCTGGGAC TTCATCCGGG CCGCACTATC GTCGGTGGCG
GATACGGCGA TCATCCCATT ACAGGATGTG CTATCGTTGG GGAGCGAGGC GCGCATGAAT
ACGCCGGGTC GCCCTGGCGG CAACTGGACA TGGCGCTTCA GCCTGCATCA GTTGACGCCG
GCGATTATCT CGCGTCTAAA GGAACTGACC ATGCTCTATG GTCGATATGT CGAACCGGCG
CCGGCGGAGC AGGAGACCGA TCAGGTCGAT GAGCAGTCGG TCTATACGTG A
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| Protein sequence | MNRQRASGIL LHPTSLPSRW GIGDLGDSAY DFADLLAAAG QRIWQVMPLG PTGYGDSPYQ
SFSAFAGNPL LINFDILLEE ALLAPSDLAD APILPDTAVD YGAVIPFKQR MLRRAFARFQ
QGFADHLRPD FEAFCETQAS WLNDYALFAA LKSANGGGSW SSWDAGLRSR DPAALDAARR
TYADEIAYQC FIQYLFFDQW LALKKYVNDL GIQMMGDIPI FVAYDSADVW AHPELFFLDQ
EGRPTVVAGV PPDYFSATGQ LWGNPLYRWD VLRERGYDWW IERFRATLTL VDIVRVDHFR
GFAAYWEVPA DEETAVNGRW IEGPGADLFE AVERALGALP IVAEDLGVIT PDVEALRDRF
GFPGMRVLQF AFGGKADQPY LPHNHIQRCV VYTGTHDNDT TLGWWRTASE KERRHVQLYL
GRSGDDIAWD FIRAALSSVA DTAIIPLQDV LSLGSEARMN TPGRPGGNWT WRFSLHQLTP
AIISRLKELT MLYGRYVEPA PAEQETDQVD EQSVYT
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