Gene Rcas_2636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2636 
Symbol 
ID5540118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3397746 
End bp3398456 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content59% 
IMG OID640894760 
Productferric reductase domain-containing protein 
Protein accessionYP_001432727 
Protein GI156742598 
COG category[S] Function unknown 
COG ID[COG2717] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.9823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAT ACATCGTTCA GGATGCATAT CATCCATCCA TACGCAACTG GCTGCAAAAG 
AACTGGGTCC ACTTTGTGCA TCTTGCGGGC CTGGCGCCGC TCGCGCTGCT GGCATGGGAT
GCGCTCAACG GGAACCTGAC GATCAATCCC ATCCAGTATC TGACGCAGCG CACCGGCTAC
GCGGCGATCA TCTTGTTGGT TGTGTCGCTC GTCTGTACGC CGCTGAGTGT CGTGAGCGGA
TGGAAGCGCA TCCTTACCCT GCGTCGCCCT TTTGGACTGT ATGGCTTTTT CTATGCTGCC
CTGCACATGC TGATCTTCAC CGCGCTCGAT TTCGGACTCA ATATCCCCCT GATTGCTCAG
GAAATTGCCG AGAAGCGATA TATCCTCGTC GGCGCAATGG CGCTCCTGCT TCTGGCGCCA
CTGGCGCTGA CTTCGACAAA AGAGTGGCAG CGGTGGTTGG GTCGATCCTG GAAGCGTCTG
CATCGCCTGG TGTACCTGGC AGTTCCGCTG GCGATTGTCC ACTATGCCTG GGCGCAGAAG
AGCGATATTC GCCAGCCGCT GATCCTTGGG GTGCTGGTGG CGGTCCTGCT GATCCTGCGT
CTGCCGGTGA TACGCCGCGG GATCGAGGTG CGACGGCGGG CATCTGGTGA TGCTCCTGCT
GTCGATGGGA GCCAGCGCAC ATCGGCCGGT GGCGCTTCTC GCACCAGATG A
 
Protein sequence
MKRYIVQDAY HPSIRNWLQK NWVHFVHLAG LAPLALLAWD ALNGNLTINP IQYLTQRTGY 
AAIILLVVSL VCTPLSVVSG WKRILTLRRP FGLYGFFYAA LHMLIFTALD FGLNIPLIAQ
EIAEKRYILV GAMALLLLAP LALTSTKEWQ RWLGRSWKRL HRLVYLAVPL AIVHYAWAQK
SDIRQPLILG VLVAVLLILR LPVIRRGIEV RRRASGDAPA VDGSQRTSAG GASRTR