Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2615 |
Symbol | |
ID | 5540097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3374519 |
End bp | 3375517 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640894739 |
Product | xylose isomerase domain-containing protein |
Protein accession | YP_001432706 |
Protein GI | 156742577 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACGAC CAGTCACTCT TTTCACGGGC CAGTGGGCGG ATCTGCCGCT GGCAACGCTA GCCGCCAAAG CCAAAAGTTT CGGCTACGAC GGATTGGAGC TCGCCTGCTG GGGCGACCAT TTTGAAGTCG ATAAAGCGCT CGAATCCGAC CGCTATATCC GCGAAAAGCG CGAACTGCTC GAACAGCACG GCTTGCAGTG CTTCGCCATC AGCAACCACC TGGTCGGTCA GTGCGTGTGC GACAACATCG ACGAACGCCA CAAAGCGATC ATCCCGGCGC GCATCTGGGG GGACGGTGAT CCCGAAGGGG TGCGCCAGCG CGCCGCCGAA GAGATGAAGA ACACCGCTCG CGCCGCCGCT GCGTTCGGCG TCAAGCAGGT CAACGGTTTC ACCGGGTCGT CGATCTGGCA CTTGATCTAT TCCTTCCCGC CCAACATTCC CGCACAGGTC GAGGCGGGGT ACGCCGATTT CGCCGCACGC TGGAATCCGA TTATGGACGT ATTCGATGAG GTGGGGGTGC GCTTCGGCTT GGAAGTGCAT CCGACCGAGA TCGCCTACGA TATTGTGACA ACCGAGAAAA CCCTGGCGGC GATTGGGCGC CGACCGGCAT TCGGCATCAA CTTCGATCCT AGCCATCTGA TCCATCAGTT TGTCGATCCG GTGCTGTTCA TCGAAACATT TGCCGACCGT ATCTACCATG TGCATGTGAA GGAGAGCCGC CGCAACCTGA ACGGGCGCAC GAGCATTCTG GCGTCGCACC TCAACTTCGG CGACCCGCGT CGCGGCTGGG ATTTCGTGTC GCCAGGGCAC GGCGATATTC AGTGGGACCC GATCTTCCGT GCGCTGACCC GCATCGGCTA TAACGGTCCC TTGTCGGTCG AGTGGGAAGA CAGCGGCATG GACCGCGAGT TCGGCGCGGC GGAAGCGTGC GCATTGGTGA AGAAGAGCGA CTTCCCTCCC AGCGCAGTCG CCTTCGATGC CGCATTCCAA AAATCGTGA
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Protein sequence | MPRPVTLFTG QWADLPLATL AAKAKSFGYD GLELACWGDH FEVDKALESD RYIREKRELL EQHGLQCFAI SNHLVGQCVC DNIDERHKAI IPARIWGDGD PEGVRQRAAE EMKNTARAAA AFGVKQVNGF TGSSIWHLIY SFPPNIPAQV EAGYADFAAR WNPIMDVFDE VGVRFGLEVH PTEIAYDIVT TEKTLAAIGR RPAFGINFDP SHLIHQFVDP VLFIETFADR IYHVHVKESR RNLNGRTSIL ASHLNFGDPR RGWDFVSPGH GDIQWDPIFR ALTRIGYNGP LSVEWEDSGM DREFGAAEAC ALVKKSDFPP SAVAFDAAFQ KS
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