| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2605 |
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| Symbol | |
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| ID | 5540087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3364598 |
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| End bp | 3367159 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640894729 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001432696 |
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| Protein GI | 156742567 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C
[TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCAGT GGTCCGATGG AAAGCGATTG GGTCGTTTTT TCCGCGAGAC ACTCCGCGCT
GCGGGCGCCG GCGTCGTAGT GCTGGCGCTG CTGTGCATCT GGTTGTGGGT TTCGACCGAT
CTGCCTTCCC CTGAGCGACT GCGCGCGCGC GCCGCTCTCG GCGCAACGCG CGTGCTGGAT
CGTCATGGTC GCCTGCTGTA CAGTGTGCCC GATCCAATGG GCGCACAACG CCGCCCTATT
CCTTTGAGCC AGATGTCGCC TGCACTGATC CAGGCGACGA TTGCAGCCGA GGATGCCAGT
TTCTATGATA ATCCCGGCAT CGATCTCCGT GGCATTGCGC GCGCGATCTG GCTCAATCTG
CGCAAGGGTC AGATCGTTGC CGGCGGCTCC ACCATTACGC AGCAACTCGC GCGTTCGTTT
CTGATCGATC CGACGCTGGC ACAGGAGCGT AGCCTGGAGC GCAAGGCGCG CGAGATCGTT
CTGGCGCTCA AACTGACGGC GGTTCTCTCC AAAGACGAAA TCCTGGAACT CTACCTCAAT
CAGACCTATT ATGGCGCGAT GAGTTACGGC GTCGAGGCGG CATCGCAGCG GTTCTTCGGC
AAATCAGCGC GCGACCTCGA TCTTGCCGAG GCGGCACTGC TCGCGGGTCT GCCGCAGGCG
CCGTCGCGCT ACGATCCGTT TGCCAGTCCC GACGCGGCGC GCGCTCGCCA GCGCGATGTG
CTGGCAGCCA TGGTTCGCAC GGGGTTTATC ACCCCAACCG AGGCGGAAAG CGCCGCCGAT
GAGCCATTGC ACTTCAGGAG CAACTGTGTC ACGCCGGGAT GCCTGCCGCG CGCGCCGCAC
TTTGTCTTTT TCGTTCTGGA ACAACTGGCG GCGGAACTCG GTCCCGACGC CGTGGCGCGC
GGCGGGCTGA CGATCACCAC AACCCTCGAC CTGGGGTTGC AGGAGGCAGC GGAACTGGCG
CTGCGCCGCC ACCTCGAGGC GCTTACCAAT CCCCGCGACG GCAGCCCCGA CCGCCGCGCG
CGCAATGGCG CGGTTGTTGT GCTCAATCCG CGTGACGGTG CGATCCTGGC AATGGTTGGC
AGCCCCGATT TCACCAACGA TGCCATTCAG GGACAGGTCA ATGCGGCGCT GGCGCTGCGC
CAGCCTGGCT CGGCGATCAA GCCGCTCACC TACGCAGCGG CCCTCGAACG CGGATGGACG
CCGGCAACCA CTATTCTCGA CATACCAACG GCATTCACCG ACGCTCATGG GCGCGTCTAT
GCGCCACAAA ACTACGACCG GGCGTTTCAC GGTCCGCTGT CGCTGCGAGA GGCGCTTGCA
ACCTCCTCGA ATGTCGCTGC CGTTCGTACC CTCGACTTCA TCGGCATCCC GGCACTGCTG
GAGATGGCAT CGCGCCTGGG GATCAGGTCG CTTGGCGACG AGCCGGGACG CTTCGGGCTG
GCGCTGACCC TCGGCGGCGG CGAGGTGACG TTACTCGAAT TGACCGGCGC CTACGCCGCT
TTTGCGAATG GCGGTATGCG GGTGACGCCC TATGCCATTC GAGACATCAG CAGCGCATCA
CTACCCGACA CTTCGACGCC GAGGACGCGA GAAGCGCCGT TACCCGCCCT CGACCCGCAG
ATCGCCTACC TGATCAGCGA CATGCTGAGC GACAGGTATG CCCGTATGCG CGCATTCGGC
GGCGCGCTCG ACATCGACCG TCCCGCAGCC GTCAAAACCG GCACCACCAC CGATTGGCGC
GACAACTGGA CGATCGGGTA TACGCCGGAT CGGGCCGTTG GCGTGTGGAT CGGAAACGCC
GATGGTCGGC GGATGGAAGC AGTCAGCGGC GTCACGGGCG CAGCGCCGGT CTGGCGGCAG
GTGATGCTGG CAGCGCACCA GGGGTTGCCG CCGCGTTCGT TCGTGCCCCC GCCGGGGATT
GTCGAAGTGA CCATTTGCGC CGAAGGCGGG TTATTGCCGT CGCCGGTCTG CCCGGCGACG
CGCCTCGAAC GGTTTGCTGC CGGTACTGCG CCGCAGCGTC CCGACGACAC GCACGTGATG
GTGCGCGTCG ATCCGGCGCG TGAATGCCGC GCGCCGGACG ATTATCCGCA GACACGCACG
ATGCTGCGCA TCTACCGTCT GCTGCCGCCG GAGGCCGAGC CGTGGGCAGT GAGTGCAGGC
GTGCCGCGCC CGCCGCGCGC CGTGTGCCCG CTTCTGCCGG ACAGCGCCAG AGAGCGACGC
GATGCTGCGC ATCCCGCCGG CAATGCGCAG ACAGGCGAAG AAACGAACGT TTCCACCTGG
CAATCGATCC CTCTGGTAAT CACATCTCCT GCACATGGCG CGGTGTTTGC GCTGAGTCCG
GGGGTTTCTA TCGAACACCA ACGCATCGCC ATCACCGCAG GAGCGATCAG GGACATCGAG
GAAGTGACCG TCTTCGTCGA TAGCGAGCCG GTTGCCGTTG CACCACGCGC CTTCTGGCAA
TTGCAGCCGG GCATCCACCG GGTGTGGGCG GAAGGGCGCG ATGCCAGCGG ACGGATCGTG
CGCAGCCCGG TGGTGGAATT CGAGGTCCGT AGCGCACCAT GA
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| Protein sequence | MAQWSDGKRL GRFFRETLRA AGAGVVVLAL LCIWLWVSTD LPSPERLRAR AALGATRVLD
RHGRLLYSVP DPMGAQRRPI PLSQMSPALI QATIAAEDAS FYDNPGIDLR GIARAIWLNL
RKGQIVAGGS TITQQLARSF LIDPTLAQER SLERKAREIV LALKLTAVLS KDEILELYLN
QTYYGAMSYG VEAASQRFFG KSARDLDLAE AALLAGLPQA PSRYDPFASP DAARARQRDV
LAAMVRTGFI TPTEAESAAD EPLHFRSNCV TPGCLPRAPH FVFFVLEQLA AELGPDAVAR
GGLTITTTLD LGLQEAAELA LRRHLEALTN PRDGSPDRRA RNGAVVVLNP RDGAILAMVG
SPDFTNDAIQ GQVNAALALR QPGSAIKPLT YAAALERGWT PATTILDIPT AFTDAHGRVY
APQNYDRAFH GPLSLREALA TSSNVAAVRT LDFIGIPALL EMASRLGIRS LGDEPGRFGL
ALTLGGGEVT LLELTGAYAA FANGGMRVTP YAIRDISSAS LPDTSTPRTR EAPLPALDPQ
IAYLISDMLS DRYARMRAFG GALDIDRPAA VKTGTTTDWR DNWTIGYTPD RAVGVWIGNA
DGRRMEAVSG VTGAAPVWRQ VMLAAHQGLP PRSFVPPPGI VEVTICAEGG LLPSPVCPAT
RLERFAAGTA PQRPDDTHVM VRVDPARECR APDDYPQTRT MLRIYRLLPP EAEPWAVSAG
VPRPPRAVCP LLPDSARERR DAAHPAGNAQ TGEETNVSTW QSIPLVITSP AHGAVFALSP
GVSIEHQRIA ITAGAIRDIE EVTVFVDSEP VAVAPRAFWQ LQPGIHRVWA EGRDASGRIV
RSPVVEFEVR SAP
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