| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2586 |
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| Symbol | |
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| ID | 5540068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3338657 |
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| End bp | 3340474 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640894713 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_001432680 |
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| Protein GI | 156742551 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCAC TCTTTCCTCT AAGTTTGAGC GAAATCCTTT TGGTCATCAT TGCCACAACC
GGTCTCGGCT GCATCATCAG TGGCCGCCTC CGTCCTGATC TAGCCGCACT GCTCGTTTTA
GTCACGCTTG GCGTGACCCG CGTCATCTCA CCGCAAGAAG CCTTCAGCGG TTTTAGCAAT
TCAGCGGTAA TCACTATTAT TGGCCTGTCG GTTATCACGG CTGCCCTCGA ACAAACCGGC
GCCGTGCGCT GGGTTGCTCA TCACCTCGCC GGTCTCAGTG GCAAGAGCGA AACGCGCATG
ATCGCCGTCT TTATGATCGC TGGCGCCCTT CTCTCCCTGG TCATGAATAA CATTGCCGCC
GGCGCCATCC TCTTGCCGGC AGCGGTTCGG GTTGCTCGCC AAGCCCAGAT TCCGGCCTCA
AAGATTTTAA TGCCGCTTTC GTTTGGCACC CTCCTCGGCG GTATGGCAAC GCTGTTTACC
ACATCCAACA TTATTCTCAG CGGAAATCTG ATCGCCCAAG GTCAACGCGG TTTGACAATG
GCCGATTTTC TCGTTTCGGG CGGGCCGATG GTCATTACCG GCCTGCTCTA CATGCTGTTC
ATCGGCCGTA GACTCTTGCC TGCACGTGAA ACCGCCGCCC TCACTACGGT GGGTGTAGTT
GACCTCCGTA GCATCTATCA GCTCGATCAG CGCTTATGGG AAGTACGGCT ACCACCAGAC
GCCCAAATCG TTGGGACCAC CTTGGCCGAG GCTAACATCA GTGCCCTGAC GGGCACGACC
GTAATCGCTA TTTGGCGTGG TCACACCGCA ATCTTCCATC CGACACCTAC CGAACAACTG
AGAGGTGAGG ATATTTTGCT GGTATTAGGT CGGGAAGATC GTGTGACCCA ACTCGAACAG
TTTGGTTGCA TCATCGGACG CAATAGCACG CCGGGGCATC ACCTAAACTT ACCAATTGAG
CTAGCTGAGG TCATCGTTGG CCCGCGTGCA CCGTTTACCG GCCAAACACT CCAACAACTC
CGCTTTCGGA CGAAGTTCGG GCTGACCGTT GTCTCGCTCT GGCGTGAAGG CCGCAGTTAT
CGTACCAACG TCGGTACCAT ACCGCTTGCC GCCGGTGATG CTTTGCTAAT TACTGGCCCA
TTAGACCGTA TTCAACAATT GGCCGAGGAG CCCGGTTTTA TCGTCCTACA TACCCAACCG
GCCGAACAAC TTGTTGGGCG GCAAGCAGTG ATTGCAGGGG TCATTACACT GGTTGTACTG
CTTGCGGCAA CAACTGGCTG GATTGCTACG GGCGAGGCAA TGTTGGCCGG CGCCGCAGCG
TTGATCATAT CCGGTTGTAT TACAATGGAT GATGCCTATC GCGCCATCGA ATGGCGGGTG
ATAACTATGA TCGCTGGCCT GCTGCCGATA GGGATTGCTC TGACCGAAAC CGGTTTAGGC
GCGAAAATAG GGACGCTATT GACAAGTAAG CTAGTGGTTT ATGGGCCAAT GGCATTGCTA
ACCGGCCTGT TTTTAACAAC TGTCCTCATG ACCCAGTTGG TCGGCGGACA AGTAACTCCT
CTCATTATCG GTCCCATCGC GATCAGTGCT GCGTTGAATG CCCACGTGAA TCCGCAAGCG
ATTGCTGTCG CCGTTGCCAT CGGTTGTTCA ACAGCCTTTC TTACCCCAAT TGCCCATCCT
GTTAGCTTGA TGATGGGGCC GGGTAATTAT CGCTCCGGCG ATTTTTTACG TGTGGGTCTT
GGATTGACGG TGGTGTGTTT GCTTACCTTG CTGATTGTGA TGCCACTGGT GTGGCGCCTC
AATTCCATCA CGCCGTAA
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| Protein sequence | MTSLFPLSLS EILLVIIATT GLGCIISGRL RPDLAALLVL VTLGVTRVIS PQEAFSGFSN
SAVITIIGLS VITAALEQTG AVRWVAHHLA GLSGKSETRM IAVFMIAGAL LSLVMNNIAA
GAILLPAAVR VARQAQIPAS KILMPLSFGT LLGGMATLFT TSNIILSGNL IAQGQRGLTM
ADFLVSGGPM VITGLLYMLF IGRRLLPARE TAALTTVGVV DLRSIYQLDQ RLWEVRLPPD
AQIVGTTLAE ANISALTGTT VIAIWRGHTA IFHPTPTEQL RGEDILLVLG REDRVTQLEQ
FGCIIGRNST PGHHLNLPIE LAEVIVGPRA PFTGQTLQQL RFRTKFGLTV VSLWREGRSY
RTNVGTIPLA AGDALLITGP LDRIQQLAEE PGFIVLHTQP AEQLVGRQAV IAGVITLVVL
LAATTGWIAT GEAMLAGAAA LIISGCITMD DAYRAIEWRV ITMIAGLLPI GIALTETGLG
AKIGTLLTSK LVVYGPMALL TGLFLTTVLM TQLVGGQVTP LIIGPIAISA ALNAHVNPQA
IAVAVAIGCS TAFLTPIAHP VSLMMGPGNY RSGDFLRVGL GLTVVCLLTL LIVMPLVWRL
NSITP
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