Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2417 |
Symbol | |
ID | 5539898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3109546 |
End bp | 3109920 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640894547 |
Product | hypothetical protein |
Protein accession | YP_001432515 |
Protein GI | 156742386 |
COG category | [S] Function unknown |
COG ID | [COG2361] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.629588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAACCGG AAGAGCGTGA TCCCGCTTAC CTTTGGGATA TGCTTATAGT GGCTCGATCA GTGGTGGAGT TTACGCACGA TATAACACGT GATGCGTTCT TGAGCGACAA TAGAGACGCG GAAATCATAA GACTGGCTGT TGAGCGCAAA CTCGAAATCC TGGGAGAAGC GGCGCGACGA GTAAGCCCGC ACTTTCGGGA AACGCATCCA GAAATTCCCC GGGCGCAAAT CATCGGATTG CGCAATCTGA TCAGTCACGA ATACGATAGA GTCGATCACG AACGCATTTA TGCCATCGCA CGCGAAGAGG CGCCACAGTT GATTGCTCTT TTAGAACCTC TAATTCCGCC GCTTCCTCCT ACGGAAGACG ACTGA
|
Protein sequence | MQPEERDPAY LWDMLIVARS VVEFTHDITR DAFLSDNRDA EIIRLAVERK LEILGEAARR VSPHFRETHP EIPRAQIIGL RNLISHEYDR VDHERIYAIA REEAPQLIAL LEPLIPPLPP TEDD
|
| |