| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2410 |
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| Symbol | |
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| ID | 5539891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3103018 |
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| End bp | 3104028 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640894540 |
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| Product | 4-hydroxy-2-ketovalerate aldolase |
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| Protein accession | YP_001432508 |
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| Protein GI | 156742379 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR03217] 4-hydroxy-2-oxovalerate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGC CGCGCCTAAC CGATACGACC CTGCGCGATG GATCGCACGC GATGCGGCAT
ATGTTCACCC GCCAGCATGT GCGCGACATT GTGACCGCAC TGGATCGCGC CGGAGTCCCG
GTGATTGAGG TGACCCACGG CGATGGACTG GCAGGCTCGT CGTTGCAGTA CGGTTTCTCG
TTCGTCTCCG ACCTCGACCT GATCGCCGAG GCGCGAGAGT CGGCAGAACG GGCGCGCATT
GCAGCGTTGC TCCTTCCCGG CATTGGGACG CGCCGTGAAC TGAAGGCCGC CGTCGAACGC
GGCGTTCAGG TGCTGCGGAT CGCCACACAA TGCACCGAAG CGGACATCAG TGAAGAACAT
TTCAAGATGG CGAAGGACAT GGGGCTGGAA ACCGTCGGTT TTCTCATGAT GTCCCACATG
CGCTCTCCCG AATTTCTGGC GGAGCAGGCA TTGCTTATGG AGTCGTATGG CGCCGACTGC
GTCTATGTGG TCGATTCGGC AGGTGCTATG CTGCCGCGCG ACGCGGCGGC GCGTGTGCGG
GCGCTCAAAG ATACGCTGCG GGTGCAGGTC GGTTTCCACG CGCACAACAA CCTGGGGCTG
GGGATCGGCA ATACCCTGGC GGCGCTCGAA GCAGGCGCCG ACCAGATCGA TGGATGTCTT
CGCGGGTTGG GCGCCGGTGC GGGCAACGCC GCCACCGAGT TGTTGGCGGC GGTGCTCGAC
CGGCTGGGTG TCAATCCAGG GCTGGATGTG CTGGCGCTGA TGGATGCCGC TGAGTATGTA
GTGGCGCCGA TCATGCCGTT TCAGCCCTTT CCCGACCGCG ATGCCATTAC TATCGGGTAC
GCCGGAGTCT ACTCGACGTT TCTGCTGCAT GCCAAACGGG TGGGCGAGCA ACTGGGCGTT
GATCCGCGCG CTATCCTGAT CGAGTTGGGG CGCCGCCAGA CAGTCGCCGG GCAGGAGGAC
TGGATACTGG ACGTGGCGCT CGAACTGGTG CGCAAACGAG AAAGGGCATA G
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| Protein sequence | MNAPRLTDTT LRDGSHAMRH MFTRQHVRDI VTALDRAGVP VIEVTHGDGL AGSSLQYGFS
FVSDLDLIAE ARESAERARI AALLLPGIGT RRELKAAVER GVQVLRIATQ CTEADISEEH
FKMAKDMGLE TVGFLMMSHM RSPEFLAEQA LLMESYGADC VYVVDSAGAM LPRDAAARVR
ALKDTLRVQV GFHAHNNLGL GIGNTLAALE AGADQIDGCL RGLGAGAGNA ATELLAAVLD
RLGVNPGLDV LALMDAAEYV VAPIMPFQPF PDRDAITIGY AGVYSTFLLH AKRVGEQLGV
DPRAILIELG RRQTVAGQED WILDVALELV RKRERA
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