Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2336 |
Symbol | asnB |
ID | 5539817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3014989 |
End bp | 3016485 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640894469 |
Product | asparagine synthetase B |
Protein accession | YP_001432437 |
Protein GI | 156742308 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.790549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.549669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTGGTA TAGCAGGCGT CTACCGCAGC ACCGATGGAA CAGGCATTGA GCGCATGCTT GCCTGGCTCA GCCATCGCGG ACCGGACGGA CGCGGCGTTG TTGCCGCCGA TAGTGGCGTG TTAGGGCATA CACGCCTGGC GATTATCGAT CTGGATGGCG GCAGGCAACC AATGGAGCAC GATGGCGCAC TGATCTGCTT CAACGGTGAG ATCTACAACT ACCGCGCGCT GCGCAACCGG TATCTGCGTG GGCAGGCGCT GGAGACCGAT AGCGACACTG AAGTGTTGCT GCGCCTGTAC CGCACGCTCG GTCCTGGATG TGTGCGTCTG CTCGAAGGCA TGTTCGCCTT CGCCATCCTT GATGGCGACG ATCTGTTCCT GGCGCGCGAT CCGATTGGCA TCAAGCCGCT CTACCTGGCG CGGAGCGGCG ATGCTCTTCT GTTCGCATCC GAAATCAAGG CGCTGGCGTT GCACGCTGAT CAGGTGACAA CGTTTCCTCC CGGTACATGG TACCACTCGC GTTTCGGCAG CCATACGTAC TACGAGATTG CTCAGGGATG GCCCCAGAGC GGCATGTTCG AGACGCCCGA TCAGGCGATC ACGGCGATTC GCGCCGTCTT GCGTGCGGCT GTTCACAAAC GTCTACTGGC GGATGTTCCC GTCGGCGTCA GCTTGAGCGG CGGACTCGAC AGCAGTATCA TTGCGCTTCT GGCGTGCGCC GAACTCGACC AGGTCGAAAC CTTCGCAGTC GGAATGGAGG GCAGCGCCGA CCTGGAGGCC GCGCGTCAGA TGGCGCGCTA CCTGGGAACG CACCATCATG AGTATGTCTA CACCCGCGCC GAGATGGAGG CCGCGCTGCC CGATGTCATC TACTATCTCG AGTCGGCCGA TCCGGCGCTG GTGCGCAGTG CGCTGCCGAA CTACTTTCTG GCGAGGTTGG CGTCGGAGCG GGTCAAAGTT ATCCTGACCG GCGAAGGCGC CGATGAGTTA TACGCCGGGT ACGACTATAT GCGATCCATT GCGTCGCCAG AAGACCTGCA CCGTGAACTT GAGACGTCGA TCCGCGAGTT ACACCGCACC AACCTTCAGC GCGCCGACCG CATGTTTATG GCATTCGGCG TCGAAGCGCG CGTGCCATTT TTGGACGTTG AGTCGATTGC TCTGGCGTTG AGCCTGCCGT CGGAATGGAA GCAGGCGGCG CCTGGCGAAC CGACAAAAAT GCTGCTTCGC CGGGCATTCG CCGACGAGTT GCCCGAGTCG ATTGTGCAGC GACCGAAGCA GAAGTTTTCC GCTGGCGCCG GTTCGATGTA TGAACTTGCA AAGGTTGCCG AGGAACGGTT CGACAACCGG ACCTTTGCGC GCGAACGTCA ACGCCTGTTG CACCGGTGGG GCTATCGTCT GCGCAATAAA GAAGCGCTCT ACTACCTCGA TACGCTGCGC GCTGTGCTCC CTGAGCGCCT GATCATGCCC GAAATGGGAG TGAGCCGGAG CCTGTGA
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Protein sequence | MCGIAGVYRS TDGTGIERML AWLSHRGPDG RGVVAADSGV LGHTRLAIID LDGGRQPMEH DGALICFNGE IYNYRALRNR YLRGQALETD SDTEVLLRLY RTLGPGCVRL LEGMFAFAIL DGDDLFLARD PIGIKPLYLA RSGDALLFAS EIKALALHAD QVTTFPPGTW YHSRFGSHTY YEIAQGWPQS GMFETPDQAI TAIRAVLRAA VHKRLLADVP VGVSLSGGLD SSIIALLACA ELDQVETFAV GMEGSADLEA ARQMARYLGT HHHEYVYTRA EMEAALPDVI YYLESADPAL VRSALPNYFL ARLASERVKV ILTGEGADEL YAGYDYMRSI ASPEDLHREL ETSIRELHRT NLQRADRMFM AFGVEARVPF LDVESIALAL SLPSEWKQAA PGEPTKMLLR RAFADELPES IVQRPKQKFS AGAGSMYELA KVAEERFDNR TFARERQRLL HRWGYRLRNK EALYYLDTLR AVLPERLIMP EMGVSRSL
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