| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2285 |
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| Symbol | |
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| ID | 5539766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2947221 |
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| End bp | 2948333 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894418 |
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| Product | glycine cleavage system T protein |
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| Protein accession | YP_001432386 |
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| Protein GI | 156742257 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein
[TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00010894 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAATG ACGGCGGGTT GCGCCGCACA CCGTTGTACG AGCGCCACGT GGCGCTCGGT
GCGCGGATGG TGGAGTTCGG CGGTTGGGAG ATGCCGGTGC AGTACAGCGG GATCATCGAT
GAACATCGCG CGGTTCGTGA AGCCGTCGGT TTGTTCGATA TCAGTCACAT GGGCGAGGTC
GAGGTGCGTG GACCGGACGC GCTGCCATTT CTCCAGCATT TGGTGACGTA TGATGTCGCT
GCGATTCAGC CAGGGGAGGC GAACTATGCG CTGATGTGCC TTCCCAATGG CGGGATCATC
GATGATACGT TTATCTACAA TCTTGGTGAT TATTATCTGA TCGTCGTTAA TGCCGCCAAC
ACGGCCAAAG ATGTCGCCTG GATGCACGAA TGCGCGAAGG GGTTTCAGGT CATGGTCGCC
GATGCGTCGG ACCGCACCGG CATGCTGGCG CTTCAGGGTC CGGCAGCGGA GGGGCTTTTG
GCGCAAGTTG CAGGGGCAGA CCTTGCAGCA TTGCCGTTCC ACGGCGTCAG GCGCGGGACT
GTGTCGGGCA TCCCGGCAAT CGTGGCGCGC ACCGGCTACA CCGGCGAGGA CGGGTTTGAA
CTCTTTGTTG CCGCCGACGA TGTCGGGCGC TTGTGGGATG CTCTGCTCAA CGCCGGACGC
AACGCGGGGT TGAAACCGTG CGGCTTGGGG GCGCGCGACA GTCTGCGCTT CGAGGCGTGT
CTGGCGCTCT ATGGTCACGA GATTACCGAA GAGACCAATC CATATGAGGC GCGGCTCGGA
TGGGTGGTCA AACTCGACAA GGGCGATTTC ATCGGACGAG ACGCCTTGCA GCGCATCAAA
CAGGAAGGCG TGCGGCGACG TCTCACCGGC TTTGAAATGG TGGGACGCGG TATTGCGCGC
AGTGAGTATG AAATCCGCGA CCTGGAAGGA ATGCCGGTCG GTCGCGTAAC GAGCGGTATG
CCATCACCGA CGCTGGAGAA AAACCTGGGC ATGGGGTATG TGCCTGTCAC CCTGTCGGCA
GAAGGGAGTG AGTTTGATGT CGTGGTGCGC GACCGACCGG TGCGCGCGCG GGTTGTGAAA
ATGCCGTTCT ACCGTCCACG CTACAAGAAG TGA
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| Protein sequence | MSNDGGLRRT PLYERHVALG ARMVEFGGWE MPVQYSGIID EHRAVREAVG LFDISHMGEV
EVRGPDALPF LQHLVTYDVA AIQPGEANYA LMCLPNGGII DDTFIYNLGD YYLIVVNAAN
TAKDVAWMHE CAKGFQVMVA DASDRTGMLA LQGPAAEGLL AQVAGADLAA LPFHGVRRGT
VSGIPAIVAR TGYTGEDGFE LFVAADDVGR LWDALLNAGR NAGLKPCGLG ARDSLRFEAC
LALYGHEITE ETNPYEARLG WVVKLDKGDF IGRDALQRIK QEGVRRRLTG FEMVGRGIAR
SEYEIRDLEG MPVGRVTSGM PSPTLEKNLG MGYVPVTLSA EGSEFDVVVR DRPVRARVVK
MPFYRPRYKK
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