| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2258 |
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| Symbol | |
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| ID | 5539739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2909354 |
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| End bp | 2910118 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894391 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001432359 |
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| Protein GI | 156742230 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00245701 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCCGCCA ACCCTGCCGT GAAACTGCTG ATCGTCGACG ATCATCCGCT CTTTCGTCAG
GGCGTGCGCG CGGCGCTCTC TATCTGCCGT GACATTGTTG TGGTCGGCGA AGCGTCATCC
GGGGAAGATG CGCTGGAGTG GATGAATGCC GCTCCGCCGA ACCTGGAACC CAATGCAGTG
GTGGTCGATC TGAACCTGCC GGGGATGAAT GGGCTGGAAC TCACCCGCCA GTTGCGCCTT
AACTATCCTG GCGTCGGCAT CGTTGTGCTC AGTGTGTACG AAAGTGATGA GCAGGCATTC
AATGCGCTAC GCGCCGGCGC GTCGGCATAT CGCTCGAAGG ATGTGCATCC CGATGAGTTG
GCGGACGTGC TCCGCCGTGT TGCGCGCGGC GAGTATGTGA TCAACGATGT GGTGCTCGAT
GATCCGAAAG TCGCCGGGCG GGTGCTGTCG CAGTTTCGCA ACCTTCCGCA GGATGTGACC
AGCCTGCAAG AGATGGAGTT CCCGCTCTTT ACTCCGTTGA GCGACCGCGA GATCGAAGTG
CTCGAACGGA TCGCCGCCGG CGGCAGCAAT CGGGAGATCG CCGAAGCGCT GCACATCAGC
ACGCAGACGG TGAAAAACCA TATTTCATCG ATCCTGCGCA AACTCTCGCT GAATGATCGA
ACGCAGGCAG TGCTCTACGC ACTGCGTCGC GGTTGGATCG AAGCGCCAGG CGCGATCCGC
AGCGAACCGC CATCATCCGA TGTTGAGGAT GATGAGGATG AGTGA
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| Protein sequence | MSANPAVKLL IVDDHPLFRQ GVRAALSICR DIVVVGEASS GEDALEWMNA APPNLEPNAV
VVDLNLPGMN GLELTRQLRL NYPGVGIVVL SVYESDEQAF NALRAGASAY RSKDVHPDEL
ADVLRRVARG EYVINDVVLD DPKVAGRVLS QFRNLPQDVT SLQEMEFPLF TPLSDREIEV
LERIAAGGSN REIAEALHIS TQTVKNHISS ILRKLSLNDR TQAVLYALRR GWIEAPGAIR
SEPPSSDVED DEDE
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