| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2243 |
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| Symbol | |
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| ID | 5539724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2892799 |
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| End bp | 2894190 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640894376 |
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| Product | amidase |
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| Protein accession | YP_001432344 |
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| Protein GI | 156742215 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR02715] amidohydrolase, AtzE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00714372 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGACC TCTTTCGGCT CACTATTGAA GACGCCGCCG ACCTGCTGGC GCGCCGTGAG
ATTTCGGCGG TCGAGTTGAC CAGCGCGCAC CTGGATCGCA TTGCGACCCA CGATACGCGC
CTCAACAGTT TTATTACGGT CACTGCCGAC CACGCGCTGG CACAGGCGCG CGCTGCCGAT
AACGAACTGG CGCGTGGCGC GCGCCGCAGT CCGCTGCACG GCATTCCGAT TGCGCTGAAA
GACCTGTACG ATACCGCAGG CGTTCGCACC ACCGCCGGTG CGACCTTCTT TGCCGAGCGT
ATGCCGGACG TGGATGCGCG CGCGGTAACT CTGCTGTACC AGGCAGGCGC GGTGTTGCTC
GGTAAACTGA ACATGCACGA ATGGGCATTA GGCGTCACGA ATATTAATCC GCACTATGGT
CCTTCGCGCA ACCCCTGGGA TACCTCGCGC ATCACCGGCG GTTCTTCGGG TGGCGCGGCG
GCGGCGCTGG CGGCCGGTCT GTGCATGGGG GCGCTAGGGA GTGATACTGG CGGCAGCATC
CGCATCCCGG CATCCCTCTG CGGTATCGTC GGGTTCAAAC CGACCTTTGG ACGGGTCAGC
CTGCAAGGTG TTGTGCCATT GAGCTGGAAC CTCGACCACG CCGGTCCAAT GGCGCGCACC
GTGACCGATG CTGCGCTCCT GTTGCAGGCG ATTGCCGGGT ACGACCCGGA CGATCCGGTG
AGCGTCGCCG CGCCGGTGGA TGATCTGCTT GCCAGCATCG ATGCAGGCGT GGGCGGATGG
CGCATCGCGC TGGCGGACGA TGCCCATTTC GGCAATGCCG ACGCAGAGGT TCTGGCATCT
GTTCATCGGG CTGCCGGCGT GTTCGAGGAG TTGGGTGCGC GCGTCGAACG TGTCGATCTC
GGTCGTGGAC AGGACGCAGC GCAAATGAAT GCGTTGATGA CCACCAGTGA TGCTGCGGCG
TTTCACCGTG ACCGGTTGCG CGCGCATCCA GAGCAGTTTG GCGCAGATGT GCGGATGCGC
CTGGAACGCG GTGCAGCCTT TACCTCCACC GAGTATATTC TGGCGCGCCG CTTTCAGAGC
GAGTGGCGGC GCCAACTGGA ACGCCTCTTC GAGCAGTTCG ATGTGTTGTT GACACCTACA
ACACCGATTA CGGCGCTCCC TATCGAAGGA CTGGATTCGG TCGAAGCAGC CCGTCAGTTG
ACCCGCTGCA CAGCGCCTTT TAACCTTGCC GGTCTGCCGG CGCTATCGGC GCCGTGTGGT
ATGAGCGCCG CCGGTTTGCC GATCGGGTTG CAGATCGTTG CAGCGCCGTG GCGTGAAGCG
CATGTGCTGC GCGCGGGCAA GGCGTTCGAG CGTGCCACCT CATGGCATCG CCAGACGCCG
CCGGGATGGT GA
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| Protein sequence | MSDLFRLTIE DAADLLARRE ISAVELTSAH LDRIATHDTR LNSFITVTAD HALAQARAAD
NELARGARRS PLHGIPIALK DLYDTAGVRT TAGATFFAER MPDVDARAVT LLYQAGAVLL
GKLNMHEWAL GVTNINPHYG PSRNPWDTSR ITGGSSGGAA AALAAGLCMG ALGSDTGGSI
RIPASLCGIV GFKPTFGRVS LQGVVPLSWN LDHAGPMART VTDAALLLQA IAGYDPDDPV
SVAAPVDDLL ASIDAGVGGW RIALADDAHF GNADAEVLAS VHRAAGVFEE LGARVERVDL
GRGQDAAQMN ALMTTSDAAA FHRDRLRAHP EQFGADVRMR LERGAAFTST EYILARRFQS
EWRRQLERLF EQFDVLLTPT TPITALPIEG LDSVEAARQL TRCTAPFNLA GLPALSAPCG
MSAAGLPIGL QIVAAPWREA HVLRAGKAFE RATSWHRQTP PGW
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