Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2242 |
Symbol | |
ID | 5539723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2890287 |
End bp | 2892539 |
Gene Length | 2253 bp |
Protein Length | 750 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640894375 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_001432343 |
Protein GI | 156742214 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00781921 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGAACTG AGAACCGGGA ACCAATGCAG ACACAGACAC GCGATCACAT CTTCACTGTT CACGGCATCG ACTGTGCGCA TTGTGCGAAC ACTATCGAGG TGAGCCTGGT TCGTCTCGAT GGCGTCGAGG TGTGTGAACT GAATGCCACG ACAGGACGGC TGCGCGTGCG CGGCGCTGTC GAACCTGATA CAGTTATCGC GTATGTGCGT TCGTTGGGGT ATGAAGCGAC GCCGACTGAC GAGACCGGTG CAACTTCGCC TTCTTCGGAC GCGCCAGTGT CGTTTGTCCG ATTTATGTGG CAGCGTGTCG AGACGCGCCT GGCATTGGTC GGCGCCGTGC TGATCGTTCC AGGTGTGGTG TTGCACGAAC TCCTTGGCTG GCGCACTCTT TGGATCGACG CGCTGGCATG GGCTGCCCTG GTCGCTGCCG GGTTGCCGAT TGCGCGCAGC GCCTGGCGAT CACTGGTCGT CAGCCGAACT ATCTCGATCA ATGCTCTGAT GACTATTGCA GCGGTCGGCG CCGTCATTAT CGGCGCGCAC GTCGAGGCAG GGCTGGTGAT GGTGTTGTTT GCGATTGGCG AGGCGATTGA AGGGTTTACG GCAGCGCGCG CGCGGGACGC CATTCGTTCG CTCATGACCC TCGCGCCCGA AACGGCGCTG CGTCTGCGCG ATGGATACGA GACGCGCGTG CCGGTTGCCG AACTGGAAGT CGGAGATGTG ATCATTGTGC GCCCTGGTGA GCGTGTGCCG ATGGATGGCG TGGTGCGCAG CGGCGCAACC CACGTCGATC AGGCGCCGAT CACCGGTGAG AGCGTGCCGG TTGTCAAAAC GCCGGGGGCA CACGTGTATG CCGGGAGCAT CAATGGCGAA GGTGTGATGG AGGTGGTCGT CACGCATCCG GCGAGTGAGA ATACGATCAG TCGGATGATC CGCCTGGTGC AGGAGGCGCA GGACCGTCGC GCGCCGGTGC AGCGTATGAT CGACCGCTTT GCAGGCTGGT ATACGCCTGC GGTGGTTGGC ATTGCTGCGC TGATGGCGAC TGTGCCGCCA TTACTGTTCG GGCAGCCGTT CTGGAACCCG TCGCCGGACG AAACCGGGTG GTTCTACCGC AGCCTGGCGT TGCTGGTTGT CGCCTGCCCC TGTGCGTTGG TGATCAGCAC GCCGGTCAGC GTGGTCAGTG CGTTGAGCGC CGCCGCGCGC GCCGGTGTGC TGATCAAAGG CGGCGCGGCG CTCGAGGCGC TTGGTGGTAT ACGCGCGGTT GCGTTCGATA AAACGGGCAC CCTGACGACC GGCAAGCCGA CGCTTGTGAT GGTGCGTTCG GTCGATTGCC GCGAACCGGA ACAGAACAAT GACGCGCGGT GTGACGCATG CGATACGCTG CTCGAACTCG CCTGTGCCGT TGAGCGGCGC TCGGAACATC CGCTGGCGCA CGCCATTGTT GATGCAGCGC GTAGGCGAGG TCTCAGCCAG ACCGTGCCGC CTGCCGCGTC GGTCGCTGCT CTGCCAGGGC ACGGTATTAT CGGCGAGGTT GAAGGGCGCA CAGTGGTGAT CGGCAGCCAC CGCTATTTCG ATGAAACATC ACCCCACCCA CGTTCCTTTT GCAACCGCGC AGAACAGGAT GCCAGCGTCG GCAGGACGCC GCTGATGATC AGCGTCGATG GGGTTTTCGC CGGTATGTTG AGCGTCGCCG ATACAGTGCG CCCCGAAAGC CGTGAGGCGG TGGCTCTACT CCGTGAGGCG GGGATCGAGC ATATCATTAT GCTGACCGGT GACCGCCGTG AGACGGCATA TGCCGTCGCT GCCGACGTCG GTGTCGATGA TGTGCGCGCT GAAGTGCTTC CTGCTCACAA AGCGGAGACG GTTGAGAATC TCCGCGCTGC CTATGGCGCT GTGGCGATGG TCGGCGATGG CATCAACGAC ACGCCTGCCC TGGCATCGGC GACGGTCGGA ATTGCTATCG GTGCAGCGCA CGGCGGCGCG AATCAGGCGA TGGAGACCGC CGATGTGACG TTGATGAGCA ACGATCTTCG TCGCCTGCCG TTCGTGTTCG CGCTGGCGCG CGCCGCGCGA CGAACCATTA TGCTCAATGT TGCATTCAGC ATCGCCGTGA AAGTGGTGTT TCTGGCGATT GTCGCAGCAG GATGGAGCAC CATGTGGATG GCGGTGTTCG CCGATATGGG AACGTCGCTG CTCGTGACGT TGAACGGTCT CCGGTTGCTT GGCTTCCGTC CCAAAACAGA AGCGTTTTCC TGA
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Protein sequence | MRTENREPMQ TQTRDHIFTV HGIDCAHCAN TIEVSLVRLD GVEVCELNAT TGRLRVRGAV EPDTVIAYVR SLGYEATPTD ETGATSPSSD APVSFVRFMW QRVETRLALV GAVLIVPGVV LHELLGWRTL WIDALAWAAL VAAGLPIARS AWRSLVVSRT ISINALMTIA AVGAVIIGAH VEAGLVMVLF AIGEAIEGFT AARARDAIRS LMTLAPETAL RLRDGYETRV PVAELEVGDV IIVRPGERVP MDGVVRSGAT HVDQAPITGE SVPVVKTPGA HVYAGSINGE GVMEVVVTHP ASENTISRMI RLVQEAQDRR APVQRMIDRF AGWYTPAVVG IAALMATVPP LLFGQPFWNP SPDETGWFYR SLALLVVACP CALVISTPVS VVSALSAAAR AGVLIKGGAA LEALGGIRAV AFDKTGTLTT GKPTLVMVRS VDCREPEQNN DARCDACDTL LELACAVERR SEHPLAHAIV DAARRRGLSQ TVPPAASVAA LPGHGIIGEV EGRTVVIGSH RYFDETSPHP RSFCNRAEQD ASVGRTPLMI SVDGVFAGML SVADTVRPES REAVALLREA GIEHIIMLTG DRRETAYAVA ADVGVDDVRA EVLPAHKAET VENLRAAYGA VAMVGDGIND TPALASATVG IAIGAAHGGA NQAMETADVT LMSNDLRRLP FVFALARAAR RTIMLNVAFS IAVKVVFLAI VAAGWSTMWM AVFADMGTSL LVTLNGLRLL GFRPKTEAFS
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