| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2239 |
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| Symbol | |
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| ID | 5539720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2886047 |
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| End bp | 2888383 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640894372 |
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| Product | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding |
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| Protein accession | YP_001432340 |
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| Protein GI | 156742211 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | [TIGR02416] carbon-monoxide dehydrogenase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.01029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00102626 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTTACG CATCACTGAT TGGCGCAGAG GTGCGCCGCA GGGAGGATCC GCGCCTGATT
TCCGGCGCAG GACGCTACGT GGGCGATATG TCGTTGCCTG GGATGCAGCA TGTCGCGTTT
GTTCGCAGCC CATACCCGCA CGCCCGGATT GGCGCGATTG ACTCATCGGC GGCGCTGCGG
GTTCCAGGCG TCACGGCGGT CGTGACCGGC GAGGACCTGC GGGATGCCTG CACCGAGATG
CTGTTTGAGG GTAGCGAAGG TTCGGATGTG GCGGAAGGGG AGTCGCCTAA GTACTCACAC
TACCCCATTT CGGTCGGTAA GGTGCGGCAT GTCGGCGAAA TCGCGGCTGC GGTCATCGCG
GTCAGTCCGG CAGCGGCGGC AGACGGCGCG GCGGCGGTCG TGATCGACTG GCAGCCGCTG
CCGGCAGTCG CCGACATGGA ACAGGCGCTG CGCCCTGATG CGCCGCTGCT CTTCGAGGGG
GCGAAGAACA ATATCGATCA CGTATGGAAA CGCAAACGCG GCGATGTCGA AGATGCCTTC
GCCAACGCTC ATCGGGTGGT GAAACTGCGC ATGGTCAGTC AGCGCCTGTC GGGGGTGCCA
ATGGAAGGGC GCGCCGTGTT GACGGCGCTC GATCCGATGA CCGAAGGATT GACGGTCTGG
ACGAGCACGC AGGCGGCGCA CTGGATCCGG CGCGACTTGG CAAAGATGCT GGGCATGGCG
GAAAATCAGA TCCGCGTGAT TGCTCCCGAT GTCGGCGGCG GGTTCGGCGT TAAGATCGGC
GTCTATCCCG AAGAGGCGGC GCTGGCGGCG CTGACGCGGC GCATGGGCAT GCCGCTGCGC
TGGGTTGAGA CGCGCCTGGA GCATATGCAG GCGACGACGC ACGGGCGCGC GCAGATTGCC
GACTACGAGG CGGCAGTGAC TGCCGATGGC GTCGTGACGG CGCTCCGCGC GCGGGTTGTC
GCCGATCTCG GCGCGTATCC GGTGTCGGCG GGCATTCCTG ACCTGACGGG GATGATGGCG
GTGGGGGTGT ATCGGATTCC TGCCGTTGAT TACGAAATCA CCTGTGTCTA CACCAACACG
ACGCCGGTTG CCGCCTATCG CGGCGCGGGT CGCCCAGAAG CCGCCTATTA TATCGAGCGC
CTGATGGATG CCGTTGCGTA TGAATTGCAC CTTGATCCGG TCGAGGTGCG GCGACGCAAC
TTTATTCCGC CTGATGCTTT CCCCTACAAG ACGCCGGTCG GTCCGATCTA CGACAGTGGC
GACTATGACA AGGCGCTGAG CAAGGCGCTT GAGGTGGGGC GCTATGCCGA TTGGCGCGCT
GAACAGCAGC AGCGCCTCGC GGCGCGCGCC GCCGGCGAGC GTGTGCCGCT GCTGGGTGTC
GGTATCGCCT GTTACGTCGA AATGTGCGGC TTTGGTCCAT ACGAAAGCGC CCACGTGCGC
GTCGAGCCGT CCGGGACGGT GACGGTCATG ACCGGCATTT CGCCGCACGG TCAGGGGAGC
GCGACGACCT TTGCACAGAT CGTTGCGGAT CAACTCGGCG CTGATTTCGA GAAGGTCATT
GTGCGCAGCG GCGATACAGC ATTGACGCCG ATGGGCAACG GTACGATGGG CAGTCGCAGT
CTGGCGGTCG GTGGTGGCGC GCTCGTGCGC GCGATTGCGC GGGTGCGCGA GAAGGCGCGC
CGGATTGCTG CGCATATGCT CGAAGCGGCG CTTGATGATG TCGTGTTCGA TGATGGGCGC
TATCATGTCA AAGGCGCGCC CGACAGCGGG CTGACGCTGG TGCAGATCGC GGAACGCGCC
TACTCTGATG ATCTGCCCGA TGATGTCGAT CCGGGTCTGG AGGCGACTGA TTTCTTCAAG
CCGCCGGCGT TGATCTATCC CTTTGGCGCG CATCTGGCAG TGGTGGAGGT CGATCCCGAC
ACCGGCATCG TGACTGTGCG CGATTATGTG AGTGTCGATG ATTGCGGTCC GCGCATCAGT
CCGCTGATCG TCGCCGGTCA GGTGCATGGC GGTCTGGCGC AGGGCATTGC TCAGGCGCTG
TTCGAGGAGG TGGTGTACGA CGAAAATGGG CAGTTGCTCA GCGGGTCGCT GATGGATTAT
ACTCTTCCGC GCGCCGATGA TCTGCCTGCG TTTGTGGTGG AACAAACAGT CACGCCAACG
CCGCACAATC CGCTTGGCGC CAAGGGGATC GGCGAAGCGG CAACAATCGG CTCGACGCCT
GCCATTGTTA ATGCCGTCGT AGACGCGCTC AAACATCTTG GCGTGCGGCA TATCGACATG
CCGCTGCGAC CTGAGAAAGT CTGGCGCGCC TGCCGTCAGG CTCAGGATGG AGCGTAA
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| Protein sequence | MAYASLIGAE VRRREDPRLI SGAGRYVGDM SLPGMQHVAF VRSPYPHARI GAIDSSAALR
VPGVTAVVTG EDLRDACTEM LFEGSEGSDV AEGESPKYSH YPISVGKVRH VGEIAAAVIA
VSPAAAADGA AAVVIDWQPL PAVADMEQAL RPDAPLLFEG AKNNIDHVWK RKRGDVEDAF
ANAHRVVKLR MVSQRLSGVP MEGRAVLTAL DPMTEGLTVW TSTQAAHWIR RDLAKMLGMA
ENQIRVIAPD VGGGFGVKIG VYPEEAALAA LTRRMGMPLR WVETRLEHMQ ATTHGRAQIA
DYEAAVTADG VVTALRARVV ADLGAYPVSA GIPDLTGMMA VGVYRIPAVD YEITCVYTNT
TPVAAYRGAG RPEAAYYIER LMDAVAYELH LDPVEVRRRN FIPPDAFPYK TPVGPIYDSG
DYDKALSKAL EVGRYADWRA EQQQRLAARA AGERVPLLGV GIACYVEMCG FGPYESAHVR
VEPSGTVTVM TGISPHGQGS ATTFAQIVAD QLGADFEKVI VRSGDTALTP MGNGTMGSRS
LAVGGGALVR AIARVREKAR RIAAHMLEAA LDDVVFDDGR YHVKGAPDSG LTLVQIAERA
YSDDLPDDVD PGLEATDFFK PPALIYPFGA HLAVVEVDPD TGIVTVRDYV SVDDCGPRIS
PLIVAGQVHG GLAQGIAQAL FEEVVYDENG QLLSGSLMDY TLPRADDLPA FVVEQTVTPT
PHNPLGAKGI GEAATIGSTP AIVNAVVDAL KHLGVRHIDM PLRPEKVWRA CRQAQDGA
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