| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2231 |
|---|
| Symbol | |
|---|
| ID | 5539712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 2879315 |
|---|
| End bp | 2880424 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640894364 |
|---|
| Product | DNA methylase N-4/N-6 domain-containing protein |
|---|
| Protein accession | YP_001432332 |
|---|
| Protein GI | 156742203 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0863] DNA modification methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0921492 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000652955 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCACTAC CTTTAAATCA GATTATTGAA GGTGATTGTG TGGAAATACT GAATACGTTA
CCAGAAACAT CCATTGACCT TATTTTTGCC GATCCTCCCT ATCATTTACA GTTACAAAAC
GAACTTCATC GACCAAATAT GACGAAAGTG GACGCTGTCG ATGACGACTG GGACAAGTTC
GAGTCGATGC AAGCGTATGA TGAATTTACT CGAACGTGGT TAACGGCGTG TAAGCGGGTC
TTGAAACCAA CCGGCACCAT CTGGGTTATC GGAACGTACC ATAATATCTT TCGTGTTGGG
GCCATGATGC AGGATTTAGG GTTCTGGATC CTCAATGATG TTATCTGGAT AAAACTAAAT
CCGATGCCTA ATTTTCGTGG TGTCCGTTTT ACCAATGCCC ATGAAACCCT CATTTGGGCA
AGTACCGGTA AAGATGCAAC ATATACGTTC AACTATTACG CGATGAAAGG GTTGAACGAT
GAAAAGCAAA TGCGTTCTGA CTGGTGGCTT TTACCGTTAG CGACGGGATC GGAACGGGTA
AAAAATGAAC ATGGCGATAA AGCCCATTCC ACCCAGAAGC CGGAGGCGTT ACTGTATCGG
GTGATTTTGT CATCCAGCAA TCCCGGTGAT GTGGTGCTTG ACCCATTTTT TGGAAGTGGA
ACAACGGGTG TTGTCGCGAA ACGTTTGCAT CGAAATTGGA TTGGAATAGA AAAGGAGAAA
CGATATGTCC AGATTGCGCA AAAGCGCATT GACGCAATGC AGCCAGAGAT GTTTGACGCT
GCGACGTTTG ATGTAAAGAG CAAAGCCAAA TCTGCTCCTA AAGTGGAGTT TTCGGTTCTG
GTCGAACATG GGTATGTACA ACCTGGGCAA CGATTGTTTT TTGGAAAAGA CAAAACGAAA
GTGGCCACAA TCAAGCCTGA TGCTCGGCTC CGTACTGCGG ACGGCTTCGA AGGCAGCATC
CATCAGGCAG GTAGCCATTA CATGAACAAT GCGCCCTGTA ATGGGTGGGA GCATTGGTTT
ATCGAAGTTG ATGGTCAAAT GATCAGTCTT GACGAAGTGA GAGAAAAGTT TCGGGTAGAC
AAGGGGCTTT ACAATGAACG ATCAGGTTAA
|
|---|
| Protein sequence | MPLPLNQIIE GDCVEILNTL PETSIDLIFA DPPYHLQLQN ELHRPNMTKV DAVDDDWDKF
ESMQAYDEFT RTWLTACKRV LKPTGTIWVI GTYHNIFRVG AMMQDLGFWI LNDVIWIKLN
PMPNFRGVRF TNAHETLIWA STGKDATYTF NYYAMKGLND EKQMRSDWWL LPLATGSERV
KNEHGDKAHS TQKPEALLYR VILSSSNPGD VVLDPFFGSG TTGVVAKRLH RNWIGIEKEK
RYVQIAQKRI DAMQPEMFDA ATFDVKSKAK SAPKVEFSVL VEHGYVQPGQ RLFFGKDKTK
VATIKPDARL RTADGFEGSI HQAGSHYMNN APCNGWEHWF IEVDGQMISL DEVREKFRVD
KGLYNERSG
|
|---|
| |