Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2229 |
Symbol | |
ID | 5539710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2878365 |
End bp | 2879030 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640894362 |
Product | type III restriction system methylase |
Protein accession | YP_001432330 |
Protein GI | 156742201 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0764738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00005113 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAATCAC AGGTGAAATC GAAAAAACGG GTGACCGATT ACGGTGAGGT GCTCACGCCA AAGCACATCG TGGATGCCAT GCTCGACCTG GTTAAGCAGG AGACGGAGCG GATTGACTCG CGCTTTCTGG AACCGGCCTG TGGAACCGGA AACTTTCTCA CGGAAATTCT GGAACGCAAG TTAAGGGTCG TCGAGCAGCG CTACGGGAAG AGTCAGGTAG AATACGAGCG TTACGCGATC CTGGCCGTTT CGTCGCTCTA CGGGATTGAC ATTCTGGCTG ATAATGTCGA AGAGTGCCGC CATCGGCTGT TTGAGGTGTT TGATGTGGCC TACACCCGCC TCTTTGGAGA AAAGACGAAA ACGCAGTGCC GGGAAGCGAT ACGCTTCATT TTGCGGCGCA ACATCATCCA TGGCGACGCG CTTTCGTTGC AGACGGTCAC GGACCCGCCG CAGCCGATTA TTTTTTCTGA GTGGTCGCTG GTCAATGGCA GTCTGCTCAA GCGGCGCGAC TTTGCCTTCC ATGAGTTGGT GAGCCATAGC GCGATGCGAG AATTGCCCCT CTTCTCCGAC CAGGGCGAGG AGGTGTTCAT CCCGGAGCCG GTGAAGGACT ATCCGCCGGT GCATGTTCTG GAGGTCGCCC ATGCCTACGA CGAACTACAA CCCTGA
|
Protein sequence | MKSQVKSKKR VTDYGEVLTP KHIVDAMLDL VKQETERIDS RFLEPACGTG NFLTEILERK LRVVEQRYGK SQVEYERYAI LAVSSLYGID ILADNVEECR HRLFEVFDVA YTRLFGEKTK TQCREAIRFI LRRNIIHGDA LSLQTVTDPP QPIIFSEWSL VNGSLLKRRD FAFHELVSHS AMRELPLFSD QGEEVFIPEP VKDYPPVHVL EVAHAYDELQ P
|
| |