Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2223 |
Symbol | |
ID | 5539704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2871629 |
End bp | 2872102 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640894356 |
Product | D-tyrosyl-tRNA(Tyr) deacylase |
Protein accession | YP_001432324 |
Protein GI | 156742195 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1490] D-Tyr-tRNAtyr deacylase |
TIGRFAM ID | [TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00563617 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000339326 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGAGCGG TCATTCAACG GGTCAGCGAA GCCTCCGTCA CCGTCGATGG CAGAGTGATC GGCGCTATCG GACGAGGATT GCTGATCCTG CTCGGTGTTG GCGTCGGCGA CACCGAAGCG GAAGCAAAAC TCCTGGCTGA AAAGAGCGCC AACCTGCGGA TTTTCGCCGA CGATGAAGGG CGTTTCAACC GTTCCCTCCT CGATATCGGC GGCGAGGCGC TGGTCGTCTC ACAATTTACG CTCTACGCCG ATACCCGGCG CGGGCGCCGC CCCAGTTTTT CCGACGCTGC GCCGCCGGAG ATCGCTGCGC CGCTCGTCGA AGCCTTTGCG AACGAACTCC AACGCCTGGG GATCGCCGTC GGCGCCGGAC AGTTCGGCGC GATGATGCAG GTTGCGCTGG TGAATGATGG TCCGGTGACG ATTCTGCTCG ACAGCGCCAT TTTTCGCGAA CCGCGCAACC GGCATGAACG ATGA
|
Protein sequence | MRAVIQRVSE ASVTVDGRVI GAIGRGLLIL LGVGVGDTEA EAKLLAEKSA NLRIFADDEG RFNRSLLDIG GEALVVSQFT LYADTRRGRR PSFSDAAPPE IAAPLVEAFA NELQRLGIAV GAGQFGAMMQ VALVNDGPVT ILLDSAIFRE PRNRHER
|
| |