| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2152 |
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| Symbol | |
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| ID | 5539632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2762850 |
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| End bp | 2764391 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640894285 |
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| Product | hypothetical protein |
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| Protein accession | YP_001432254 |
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| Protein GI | 156742125 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2367] Beta-lactamase class A |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0167915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00298164 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAACA TAACACACGC GCATGCCACG TTGCTGCGCA CTCTGTTGCT GATGTGCCTG
GCATTGCTGG TTGCGTGCAG CGCGCCGACG AGCGCAACAG TTGCTCCCTC GCCTGACGTG
TCGCCAACTG TCGAATCGAC GGCGACCCCT GTTCCATCTC CTGTTCCAAT ACCAACCCCT
GCGCCCACCG CTACGCCGGA ACCGCGTCTG GCGGAAGGAG TCTACATCGC CGGTATCGAG
GTTGGCGGGT TGACCTCAAC CGAGGCGCGG CAGGAATTGA CGACACGCCT GGCGCCGCTG
TTGCGTCCGC TCGATATTCG CGCTGGCGAT CAGGAGATCA TGCTGCGACC TGAAGATATT
GGAATGCGCA TCGCTCTCGA TTCTATGCTC GACGTGGCAC GCGCTGCGCC TATCGGCGAG
CGTGTGCCGT TGCAGATTGT GTACCATGAA GACAAACTGC GCGCAGTGTT GACAGCGCTG
AGTGAAGAAG TCAGCGTTCC AGCACAATTT TCGGTCCTGA CCGAAACCAA AACTATTTCG
CGCAGTTTTG TGATGGATGG CGGGTTGAGC ATCGATATCG ACAGTGCCAT ACAACAGATC
GATGATCGCC TGCGCTCGGT GGGCGCGCCA CGACGTGTGA CGCTCACGCT TGCACCGCAG
CGCGGACTGG CAGTGCGACC GGATCCGCAG ATGCTTCAGG AGCAGCTTGA AACCATGGCG
GACTCCTGGC GCGGCGTGAT CGGCGTGTAC GTCTATGACC TGACGAAGGC CGAAGTGGTC
GCTGCTCTTA ATCCCGATAC CGCATTTTCA GCAGCCAGCA CGATCAAGAT GCCGATTATG
CTCAACGCCT ATATCAATCT GCCCGAATTC ACCGAAAAGC AGCAGGCGGC GCTGCGCAGC
ATGATTGTTG ACAGCGACAA CCTGGCTGCG AATGCATTAC TTGCGGCATC CGTCGGCGGC
GTCGGCACTG AAGACGCCAT CGTCGGCGCA GAACGGATGA GTGCAATGCT GGCTGATCTG
GGTTTTACCG AGACGTTTCA GTACGTGCCG TTCGAGGCGC AGGATTATAT CAAACTGATG
AAACTCAAGG TAAAGGCGGG TCCTGCCCGT GGCGGGAAGC CGCCTTACAC CGATGCCGGA
CGTTATCTGC GCACCACGCC GCGCGAAATG GCGACGCTGT ATGTTGAAGT CGATCGCTGC
GCGCGTGGCG AAGGTCTGCT GCTGGAGCGT TTCGACGATA TGCTCACGCC GGAACGTTGC
CAGGAAATGC TCGATAATCT GGCAAACAAT GATGATAACC GACGCATGGT TGCCGGCATT
CCCGAGGGCG TGCGCGTCGA GCACAAGAGC GGATGGATCG CCGATATGCA GGCGGATGTC
GGTATTGTAC GCTCGCCTGG CGGCGATTAT GTGATCGCCA TTTATGTGTA TCGCCCTCTT
GCCTCGGGTG ATGCACCGGT TCCCGACCAG ATTATGATGT CCACCATCGC TGCATTTTCG
CGGTTGGTCT ACACATATTT CAACCCGCTG ACTGCATCGT AA
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| Protein sequence | MKNITHAHAT LLRTLLLMCL ALLVACSAPT SATVAPSPDV SPTVESTATP VPSPVPIPTP
APTATPEPRL AEGVYIAGIE VGGLTSTEAR QELTTRLAPL LRPLDIRAGD QEIMLRPEDI
GMRIALDSML DVARAAPIGE RVPLQIVYHE DKLRAVLTAL SEEVSVPAQF SVLTETKTIS
RSFVMDGGLS IDIDSAIQQI DDRLRSVGAP RRVTLTLAPQ RGLAVRPDPQ MLQEQLETMA
DSWRGVIGVY VYDLTKAEVV AALNPDTAFS AASTIKMPIM LNAYINLPEF TEKQQAALRS
MIVDSDNLAA NALLAASVGG VGTEDAIVGA ERMSAMLADL GFTETFQYVP FEAQDYIKLM
KLKVKAGPAR GGKPPYTDAG RYLRTTPREM ATLYVEVDRC ARGEGLLLER FDDMLTPERC
QEMLDNLANN DDNRRMVAGI PEGVRVEHKS GWIADMQADV GIVRSPGGDY VIAIYVYRPL
ASGDAPVPDQ IMMSTIAAFS RLVYTYFNPL TAS
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