Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2141 |
Symbol | |
ID | 5539621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2751333 |
End bp | 2752553 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640894275 |
Product | hypothetical protein |
Protein accession | YP_001432244 |
Protein GI | 156742115 |
COG category | [S] Function unknown |
COG ID | [COG3214] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.129516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.124247 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACTGA CGCTGACTCC CAATGCGATT CGTCCGTTGC TGCTGACCGT CCAGGGTCTC GACCGCCCAA AGAAACACCC GGCGACCAAA GACTCGGTTC TGGCAGCGAT GCAGCGGATG AAGGCGCTTC AGATCGATAC GATCCATGTG GTCGCGCGTA GTCCATATCT GGTGTTATGG AGCCGTCTTG GCGCATATGA GCCACGCTGG TTGACCGATC TGCTGGCGGA GCGGGCCATC TTCGAATACT GGTCGCACGA GGCATGCTTT TTGCCCATCG AGGATTACCC GGCCTACCGC TCGTTGATGC TGGCGGGGCA GACGCGCAGC AACACCTATG CGCGCCGGTG GCTGCACGAG AACCGGACGA TTGCCGCAGC GTTGATGGAT CATATTCGCA ACAACGGACC GGTTCGCTCA GCCGAATTCG CCCGTACAGA CGGCACGAGG GGAGGATGGT GGAACTGGAA GGTCGAAAAG ATGGCGCTAG AAATGCTCTT CATCGTTGGC GATCTGATGA TCGACCGGCG TGAGCATTTT CAGCGCCTCT ACGACCTACG CGAGCGAGTT TTGCCCGCAT GGGACGATAC CTGTGCACCC GATGTGGAGG TAGCGCAGCG CACCCTGATC CTCGCAGCAG CACAGGCGCT CGGTGCAGCG CCGGCGCGCT GGCTGGCAGA TTACTTTCGC ACCGGCAAGG CGGAAACGGC GCGCATTGCC GCTGCTCTGG CAGCCGAAGG CGCCCTTGCG ATAGCGCATG TCGCAGGATG GCGCGAGCCG GTCTACATTC ATCCACATCG CCTGCCGCTG GCGCAGGCTG CCGCCGATGG GGCGCTCCAA TCAACAGTCA CCACGTTGCT TTCGCCATTC GATCCGGTCG TATGGGATCG GCGACGGGCG CTGGAATTGT TTGGCTTCGA CTATCGCATC GAATGTTATA CTCCTGCATC CAAACGACGG TATGGCTATT TTACGCTGCC CATCCTGCAC CGGGGGGCGC TGGTCGGGCG GCTCGACCCG AAAGCGCACC GCAAAGACGG CATCTTCGAG GTCAAGGCGC TCTACCTCGA ACCAGGCGTC GATCCCGACG AAGACCTGGC GATCAATCTG GCAGAGGCGT TGCGCTCCTG CGCCGTATGG CACGGCACGC CGGAGGTCGT CGTCCGGTTC TGCGATCCGC CGGCGTTTGG CGCGTTGTTG AAGCGCGCCT TGCGTCTCTG A
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Protein sequence | MPLTLTPNAI RPLLLTVQGL DRPKKHPATK DSVLAAMQRM KALQIDTIHV VARSPYLVLW SRLGAYEPRW LTDLLAERAI FEYWSHEACF LPIEDYPAYR SLMLAGQTRS NTYARRWLHE NRTIAAALMD HIRNNGPVRS AEFARTDGTR GGWWNWKVEK MALEMLFIVG DLMIDRREHF QRLYDLRERV LPAWDDTCAP DVEVAQRTLI LAAAQALGAA PARWLADYFR TGKAETARIA AALAAEGALA IAHVAGWREP VYIHPHRLPL AQAAADGALQ STVTTLLSPF DPVVWDRRRA LELFGFDYRI ECYTPASKRR YGYFTLPILH RGALVGRLDP KAHRKDGIFE VKALYLEPGV DPDEDLAINL AEALRSCAVW HGTPEVVVRF CDPPAFGALL KRALRL
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