Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2128 |
Symbol | |
ID | 5539608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2735434 |
End bp | 2737509 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640894262 |
Product | protein serine/threonine phosphatase |
Protein accession | YP_001432231 |
Protein GI | 156742102 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0631] Serine/threonine protein phosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.66852 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.458687 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACGA GCACCGCCAG TTTTGATATT GATGCGCGCA CCGATCGTGG TCGCCAGCGT TCCAATAATC AGGATAGCAT CGGGCGCGCC GATCAGTGGA CAACAGATCG TCATCAACCC ATTGACCGCG CGCTGCGTGA GCGGTATGGT CGTCTCTATA TCGTCGCCGA TGGCGTTGGC GGCAACGCCG ATGGCGCCGA TGCCAGCCGT ATGGTTGTGG ATGAAGTGAT GCGCGTGTTC TATTTCGATC CCGCCGGTGT GTTGCCCGAA GAACCGGTTG AACGTCTGCG TGCCGCTATT GAACACGCCA ACAACAGGGT GCATGCTGAA GCGCAACGTC GCCGCAACAA CATGGCATCA ACTATCGTTG CTGCTCTGAT CCACAACGAT ACCCTGACCA TTGCCAATGT CGGCGACAGT CCGGCATTCC TGTGTCGCAA TGGACAGTCG CCCCAACGAT TGACGAAAGC GCATATTCGT CGGGAAGCAG ACGGTAGCAC TGCGCTGGCG CAGGCGATGG GCGATCCGCG CGTGTATCCG GCAGTCTTCT CTTTGCCGTT GCAGCAGGGT GATGCAGTGG TGCTCTGTTC CGACGGATTG ACCGATCTGG TGCAGCCCAC AGAGATTGCC GAGATCGTGA ACGGCAAAAC TGCCAGCGCC GCCACGCGCG CCCTGATTGC TCTGGCGAAC CGTCGCGGCG GGCACGATAA TATCAGCGCA ATTGTGGTGC GAAATGCTCC GCCGCCGGTG TCATCCGTAT CGCCACATAT GAGCAAACGA CTGCGCTTGC TGATCATCAG CCTGCCGGTC GCTATCCTGC TTGCTGTGTT TGTCATTGCC CTTCCCTTCT TGAACCCACT GCCCGATACC GGTGGCGGAG CAGTGCGCCC AACCGCAGCA GCCCAGAACC TTGTTATTCC CGGCAGTCAT AACAACCCGT CGGATCTCGC TCAATTGCCG ACGGTAACCC TGGGTGCTCT GCCAACCGCC ACCGACACGC CGACTCCCGC CCCTACCCGG CAGGCGCGTC CAACCATGCG CCCAACTCTC ATCAGTGCTA CACCTGTAAC AACAACTGTA GTAACAGAAG TAAGCAGCGC CGATAATCCG TCGCCGACTC AAACGCCTGA ATTGAAAATG CCGAACGTTA TCGGCAAATC GCGTAGCGAT GCGGAACAGA TTATCAAGGA TGTTCTCAAA GTCGCGCCTG TTATCGAAGA GGTTCGAGAC GATAGTGCAA CGCCGTCTGA TCATGTGGTT GCAACCGAAC CGAGGCCGGG TGAGCCGGTT CGTTCGGGAG TCCCCATCAA GCTGAGGATT AAGAGTCGCT CATCGTCTGC GCCGCCTGAC CATAATCCGG CGCCGAACAA TCCGCCTTCT GCTCCCGACA AACCGCCATC TCCGCCAGAC AATCCGCCGG CGCCGTCTGC GACGCCAACG CCGGGGTTGT CAGCGCCCGC TCCGTCGCTC ACGCCTACCA AATCGCCAGG TCCATCGGCA ACGCCAACAA CACCTTCACC CGGACCTTCA CCCGACAATT CGGGCGGCTC CGGCGGTACG GGCGGTACGG GCGGCTCCGG CGGTACGGGC GGTTCTGATG GCGGCTCCGG CGGTACGGGC GGCGGCTCCG GCGGTACGGG CGGCTCTGGC GGTACGGGCG GCTCCGGCGG TACGGGCGGT TCGGGCGGTA CGGGCGGTTC TGATGGCGGC TCCGGCGGTA CGGGCGGTTC GGGCGGTACG GGCGGTTCGG GCGGCTCCGG CGGTACGGGC GGCTCCGGCG GTACGGGCGG TTCTGATGGC GGCTCCGGCG GTACGGGCGG TTCTGATGGC GGCTCCGGCG GTTCGGGCGG TTCGGGCGGT TCGGGCGGTT CGGGCGGCTC CGGCGGTACG GGCGGTACGG GCGGCTCCGG CGGTTCGGGC GGTTCTGATG GCGGCTCCGG CGGTACGGGC GGTTCTGATG GCGGCTCCGG CGGTACGGGC GGTTCTGATG GCGGCTCCGG CGGTACGGGC GGCGGCTCCG GCGGTACGGG CGGTACGGGC GGCTCCGGCG GTACGGGCGG CGGGTCTGGC AACTGA
|
Protein sequence | MSTSTASFDI DARTDRGRQR SNNQDSIGRA DQWTTDRHQP IDRALRERYG RLYIVADGVG GNADGADASR MVVDEVMRVF YFDPAGVLPE EPVERLRAAI EHANNRVHAE AQRRRNNMAS TIVAALIHND TLTIANVGDS PAFLCRNGQS PQRLTKAHIR READGSTALA QAMGDPRVYP AVFSLPLQQG DAVVLCSDGL TDLVQPTEIA EIVNGKTASA ATRALIALAN RRGGHDNISA IVVRNAPPPV SSVSPHMSKR LRLLIISLPV AILLAVFVIA LPFLNPLPDT GGGAVRPTAA AQNLVIPGSH NNPSDLAQLP TVTLGALPTA TDTPTPAPTR QARPTMRPTL ISATPVTTTV VTEVSSADNP SPTQTPELKM PNVIGKSRSD AEQIIKDVLK VAPVIEEVRD DSATPSDHVV ATEPRPGEPV RSGVPIKLRI KSRSSSAPPD HNPAPNNPPS APDKPPSPPD NPPAPSATPT PGLSAPAPSL TPTKSPGPSA TPTTPSPGPS PDNSGGSGGT GGTGGSGGTG GSDGGSGGTG GGSGGTGGSG GTGGSGGTGG SGGTGGSDGG SGGTGGSGGT GGSGGSGGTG GSGGTGGSDG GSGGTGGSDG GSGGSGGSGG SGGSGGSGGT GGTGGSGGSG GSDGGSGGTG GSDGGSGGTG GSDGGSGGTG GGSGGTGGTG GSGGTGGGSG N
|
| |