Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2117 |
Symbol | |
ID | 5539597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2720149 |
End bp | 2721390 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640894251 |
Product | mandelate racemase/muconate lactonizing protein |
Protein accession | YP_001432220 |
Protein GI | 156742091 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.457647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGATCAA CGGTCATTAC CGCAGTCCAT GCCCGTGATG TTCGCTTTCC CTTAAAGCCG GGCGAGGGAG TGGACGCCAT CCATACCAAC CCGCAGTACG CCTACGCAGT CACGCTGCTC GCCACAAATA CATCCCTGCG CGGCACGGGG CTGGCCTTCA CGCTTGGCGC CGGCACCGAA CTGGTCTGCG ATGCTATCCG CATGCTGGCG CAGCCGCTGG AGGGACGCGA GATCGAAGAG TTGATGGCCG ATTTCGGTCG TCTCACTCGT CAGATCGCCG ATCATCCACA GATGCGCTGG CTTGGTCCCC ATAAAGGCGT TGTGCATCTG GCGCTTGCCT CGCTGACGAA TGCCTGTTTT GATTTATGGG CTAAAGCGCG CGGCGTGCCG CTCTGGAAAC TGTTGCTCGA TTTGACGCCA GAAGCGATCA TGGCGCTTCT TGACCTGAGT TACCTGGAAG ATGTCCTCAC CCCGTCTGAG GCGATCAATA TGCTGTATCG TGAAATGACT CACCGCAACG AACGCGCAGC AATTCTGACG CAGGGATATC CCGGCTATGA CACCTCGGTC GGCTGGTTTC ATTACGATGA TCGGCAACTG ATCGAAAATG CGCGGCGTGC TGCGGATGCC GGTTTTTCGG CTATGAAACT GAAGGTCGGC TCACCCGACC CAGCCCATGA TATTCGTCGG GCGCTACTGG TCCGCGAGAC GGTAGGACGC GACGTGCGCA TCATGCTGGA CGCCAACCAG CAATGGACGT TGCCGATGGC GCTGCACGCC TGTCAGGAAC TTGCATCGAT GCAACCATAC TGGATCGAGG AGCCGACCCA TCCCGATGAT GTGATCGGAC ACCAAACGCT TGCGCGATCA ATTGCGCCGC TTCGGCTGGC AGTCGGCGAA CACCTTCCCA ATCGAGTGGT CTTCAAAAAC TATATGCAGG CCAATGCTGC TCATTTCATT CAAGCAGACT GCACGCGCGT CGGCGGGGTT AGCGAGTTCA TCACGGTGAG TCTGCTCGCC AGGCGCTTCA ACCTGCCGGT AGCGCCACAC GTCGGGGATA TGGGACAAAT TCATCAGCAC CTGACACTCT TCAACCGGAT TGCGCTGGGA CACGAGACCG TCTTTCTTGA GTATATCCCG CACCTGCGCG ATCGCTTCCG CTACCCGGCA CAGGTTGAAG ATGGCGTCTA TCGCACACCA CAGGAGCCAG GCAGCAGCGC CGATTTAATC GATTGCACCT GA
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Protein sequence | MRSTVITAVH ARDVRFPLKP GEGVDAIHTN PQYAYAVTLL ATNTSLRGTG LAFTLGAGTE LVCDAIRMLA QPLEGREIEE LMADFGRLTR QIADHPQMRW LGPHKGVVHL ALASLTNACF DLWAKARGVP LWKLLLDLTP EAIMALLDLS YLEDVLTPSE AINMLYREMT HRNERAAILT QGYPGYDTSV GWFHYDDRQL IENARRAADA GFSAMKLKVG SPDPAHDIRR ALLVRETVGR DVRIMLDANQ QWTLPMALHA CQELASMQPY WIEEPTHPDD VIGHQTLARS IAPLRLAVGE HLPNRVVFKN YMQANAAHFI QADCTRVGGV SEFITVSLLA RRFNLPVAPH VGDMGQIHQH LTLFNRIALG HETVFLEYIP HLRDRFRYPA QVEDGVYRTP QEPGSSADLI DCT
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