| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2112 |
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| Symbol | |
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| ID | 5539592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2713991 |
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| End bp | 2715121 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640894246 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001432215 |
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| Protein GI | 156742086 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.899475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGG TTGCAAAAGA AGCACAATCT CAGACTGGTC GCCCCCGAAC GTTCGACGAT
GTCGGGCAAT TGTCGCAATA CCAGTTGATC TGGCGGCGCT ACAAGAAGAA CCGCCTCTCG
GTTGTTGGCG CAATTGCATT GATCATCATG TATGCGATGG CATTGTTTGC CGATGTGATT
GCACCGTATG ACCCGAATGA GATTGATGCA AATCACCAGT ACGCCCAACC TTCGACAATT
GTCTGGGCGA ATGGTGGGCT GGCGCTTCAG GGGATGCGGC AGGTTGTCGA CTCGGTCAAC
TTTCAGATCA TTTATGAACC CGATCCCGAT GTGACGTATC CGATCCGGCT GTTTGTGCGC
GGCAGTCCGT ATATCATGTG GGGTTTTATC CCGCTCGACA TCCATTTGTT TGGCGTCGAT
GCACCGCCTG AAGCGAACGC CAAAATCTTT CTCTGGGGCG CCGACCGTCA GGGGCGCGAT
TTGTTTTCTC GCGTGCTCAA AGGCGCTCAG ATATCGCTCA CGATCGGCTT CTTTGGCGTG
ATGATCAGTA TGGTGATCGG CTCGATTGTC GGAACGGCGT CGGGGTACTT CGGTGGTTGG
ATCGATAATG TCATTCAGCG GGTCATCGAG TTGATCCAGA CATTCCCCTT TATCTCGCTG
TTTATTGCCA TTGCGGCGGC GCTGCCGATT ACCATGCCGG TCGTGCAGCG GTATATGTTG
ATCACGATGA TTCTGGCGTT GATCACATGG ACGGGTTTTT CGCGCGAGGT GCGCGGCAAG
GTGCTGAGTT ATCGCAACGC CGATTACACG GCGGCGGCGA TTGCGGCTGG CGCGTCACAC
TGGCGGGTCA TTACGACCCA CATGATCCCG AATGCAATGA GCCATATCAT CGTTGTGGCT
TCGTTCGCGG TGCCGGGCGC GATTGCTGCC GAAACCGCGC TCAGTTTCCT CAACCTGGGT
ATGCTGCCGC CAGCCGTGAG TTGGGGCGTG TTGTTGCAGG ATGCACAGCA GATCAAGTCG
GTGACCCTCT ATCCGTGGCT GTTGATCCCA CTGGGCGCCA TTGTGCTGGC GTCGTTGTGT
CTGTACCTGC TGGGCGACGG TTTGCGCGAT GCGGTCGATC CGTATGCGTA G
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| Protein sequence | MATVAKEAQS QTGRPRTFDD VGQLSQYQLI WRRYKKNRLS VVGAIALIIM YAMALFADVI
APYDPNEIDA NHQYAQPSTI VWANGGLALQ GMRQVVDSVN FQIIYEPDPD VTYPIRLFVR
GSPYIMWGFI PLDIHLFGVD APPEANAKIF LWGADRQGRD LFSRVLKGAQ ISLTIGFFGV
MISMVIGSIV GTASGYFGGW IDNVIQRVIE LIQTFPFISL FIAIAAALPI TMPVVQRYML
ITMILALITW TGFSREVRGK VLSYRNADYT AAAIAAGASH WRVITTHMIP NAMSHIIVVA
SFAVPGAIAA ETALSFLNLG MLPPAVSWGV LLQDAQQIKS VTLYPWLLIP LGAIVLASLC
LYLLGDGLRD AVDPYA
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